RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 ATRAIDQ6UW56 229 aa14.46□□□□□ -0.09
VTI1B-201ENST00000216456 SCXQ7RTU7 201 aa14.46□□□□□ -0.09
VTI1B-201ENST00000216456 LINC00528Q8N1L1 170 aa14.46□□□□□ -0.09
VTI1B-201ENST00000216456 COX11Q9Y6N1 276 aa14.46□□□□□ -0.09
VTI1B-201ENST00000216456 CENPWQ5EE01 88 aa14.45□□□□□ -0.1
VTI1B-201ENST00000216456 C11orf52Q96A22 123 aa14.45□□□□□ -0.1
VTI1B-201ENST00000216456 CHCHD7Q9BUK0 85 aa14.45□□□□□ -0.1
VTI1B-201ENST00000216456 TPPP3Q9BW30 176 aa14.45□□□□□ -0.1
VTI1B-201ENST00000216456 KCNIP4Q6PIL6 250 aa14.44□□□□□ -0.1
VTI1B-201ENST00000216456 CLPSL2Q6UWE3 100 aa14.44□□□□□ -0.1
VTI1B-201ENST00000216456 CHCHD5Q9BSY4 110 aa14.44□□□□□ -0.1
VTI1B-201ENST00000216456 ANGP03950 147 aaKnown RBP14.43□□□□□ -0.1
VTI1B-201ENST00000216456 ELOBQ15370 118 aa14.43□□□□□ -0.1
VTI1B-201ENST00000216456 GAGE6Q13070 117 aa14.42□□□□□ -0.1
VTI1B-201ENST00000216456 DEFB104AQ8WTQ1 72 aa14.42□□□□□ -0.1
VTI1B-201ENST00000216456 MANBALQ9NQG1 85 aa14.42□□□□□ -0.1
VTI1B-201ENST00000216456 MGPP08493 103 aa14.41□□□□□ -0.1
VTI1B-201ENST00000216456 IGLC6P0CF74 106 aa14.41□□□□□ -0.1
VTI1B-201ENST00000216456 EIF5AP63241 154 aaKnown RBP14.41□□□□□ -0.1
VTI1B-201ENST00000216456 OR2D3Q8NGH3 330 aa14.41□□□□□ -0.1
VTI1B-201ENST00000216456 C1orf43Q9BWL3 253 aa14.41□□□□□ -0.1
VTI1B-201ENST00000216456 TRBV20OR9-2A0A075B6H5 130 aa14.4□□□□□ -0.1
VTI1B-201ENST00000216456 TRAV1-1A0A0B4J248 108 aa14.4□□□□□ -0.1
VTI1B-201ENST00000216456 AP1S3Q96PC3 154 aa14.4□□□□□ -0.1
VTI1B-201ENST00000216456 C19orf71A6NCJ1 209 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 HLA-DQA1P01909 254 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 CRPP02741 224 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 SMIM17P0DL12 118 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 Q0VG73 95 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 FER1L6-AS1Q8NA97 138 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 VAX2Q9UIW0 290 aa14.39□□□□□ -0.11
VTI1B-201ENST00000216456 M0QY20 66 aa14.38□□□□□ -0.11
VTI1B-201ENST00000216456 RBX1P62877 108 aa14.38□□□□□ -0.11
VTI1B-201ENST00000216456 SUMO4Q6EEV6 95 aa14.38□□□□□ -0.11
VTI1B-201ENST00000216456 CIRBP-AS1Q8TBR5 109 aa14.38□□□□□ -0.11
VTI1B-201ENST00000216456 USP17L23D6RBM5 183 aa14.37□□□□□ -0.11
VTI1B-201ENST00000216456 SULT1A2P50226 295 aa14.37□□□□□ -0.11
VTI1B-201ENST00000216456 CHAC1Q9BUX1 264 aa14.37□□□□□ -0.11
VTI1B-201ENST00000216456 PLA2G1BP04054 148 aaKnown RBP14.36□□□□□ -0.11
VTI1B-201ENST00000216456 GNG4P50150 75 aa14.36□□□□□ -0.11
VTI1B-201ENST00000216456 KRTAP10-4P60372 401 aaPredicted RBP14.36□□□□□ -0.11
VTI1B-201ENST00000216456 KRTAP26-1Q6PEX3 210 aa14.36□□□□□ -0.11
VTI1B-201ENST00000216456 LINC00269Q8N2A0 174 aa14.36□□□□□ -0.11
VTI1B-201ENST00000216456 DAZAP1Q96EP5 407 aaKnown RBP14.36□□□□□ -0.11
VTI1B-201ENST00000216456 LRP1Q07954 4544 aaKnown RBP14.35□□□□□ -0.11
VTI1B-201ENST00000216456 PRSS1P07477 247 aa14.35□□□□□ -0.11
VTI1B-201ENST00000216456 MEF2BQ02080 365 aaPredicted RBP14.35□□□□□ -0.11
VTI1B-201ENST00000216456 MED9Q9NWA0 146 aa14.35□□□□□ -0.11
VTI1B-201ENST00000216456 RAB5CP51148 216 aa14.34□□□□□ -0.11
VTI1B-201ENST00000216456 NKX2-5P52952 324 aaPredicted RBP14.34□□□□□ -0.11
VTI1B-201ENST00000216456 LYZL1Q6UWQ5 148 aa14.34□□□□□ -0.11
VTI1B-201ENST00000216456 GFRA4Q9GZZ7 299 aa14.33□□□□□ -0.12
VTI1B-201ENST00000216456 PRR34Q9NV39 138 aa14.33□□□□□ -0.12
VTI1B-201ENST00000216456 IGLV10-54A0A075B6I4 117 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 TRBV25-1A0A075B6N4 114 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 J3QL48 77 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 P01737 135 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 BCL2P10415 239 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 RPS20P60866 119 aaKnown RBP14.32□□□□□ -0.12
VTI1B-201ENST00000216456 IQCJQ1A5X6 159 aa14.32□□□□□ -0.12
VTI1B-201ENST00000216456 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.32□□□□□ -0.12
VTI1B-201ENST00000216456 MIAQ16674 131 aa14.31□□□□□ -0.12
VTI1B-201ENST00000216456 IGLV4-60A0A075B6I1 120 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 IGHV1-24A0A0C4DH33 117 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 NTF3P20783 257 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 CACNG7P62955 275 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 C20orf203Q8NBC4 194 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 NUDT10Q8NFP7 164 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 NUDT11Q96G61 164 aa14.3□□□□□ -0.12
VTI1B-201ENST00000216456 PANO1I0J062 215 aa14.29□□□□□ -0.12
VTI1B-201ENST00000216456 PDE6DO43924 150 aa14.29□□□□□ -0.12
VTI1B-201ENST00000216456 IFNA1P01562 189 aa14.29□□□□□ -0.12
VTI1B-201ENST00000216456 C14orf177Q52M58 125 aa14.29□□□□□ -0.12
VTI1B-201ENST00000216456 EIF5AL1Q6IS14 154 aaKnown RBP14.29□□□□□ -0.12
VTI1B-201ENST00000216456 TCTE3Q8IZS6 198 aa14.29□□□□□ -0.12
VTI1B-201ENST00000216456 TEX46H3BTG2 121 aa14.28□□□□□ -0.12
VTI1B-201ENST00000216456 K7EN84 100 aa14.28□□□□□ -0.12
VTI1B-201ENST00000216456 RASL11AQ6T310 242 aa14.28□□□□□ -0.12
VTI1B-201ENST00000216456 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
VTI1B-201ENST00000216456 FAT3Q8TDW7 4589 aa14.27□□□□□ -0.12
VTI1B-201ENST00000216456 PKIAP61925 76 aa14.27□□□□□ -0.13
VTI1B-201ENST00000216456 REG3AQ06141 175 aa14.27□□□□□ -0.13
VTI1B-201ENST00000216456 SMIM12Q96EX1 92 aa14.27□□□□□ -0.13
VTI1B-201ENST00000216456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.27□□□□□ -0.13
VTI1B-201ENST00000216456 TRAV26-2A0A0B4J265 109 aa14.26□□□□□ -0.13
VTI1B-201ENST00000216456 H7C1H1 209 aa14.26□□□□□ -0.13
VTI1B-201ENST00000216456 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
VTI1B-201ENST00000216456 DPH3P1Q9H4G8 78 aa14.26□□□□□ -0.13
VTI1B-201ENST00000216456 KRTAP29-1A8MX34 341 aaPredicted RBP14.25□□□□□ -0.13
VTI1B-201ENST00000216456 F2Z2F3 143 aa14.25□□□□□ -0.13
VTI1B-201ENST00000216456 CTRLP40313 264 aa14.25□□□□□ -0.13
VTI1B-201ENST00000216456 FOXA3P55318 350 aaPredicted RBP14.25□□□□□ -0.13
VTI1B-201ENST00000216456 C9orf62Q8N4C0 152 aa14.25□□□□□ -0.13
VTI1B-201ENST00000216456 OCC1Q8TAD7 63 aa14.25□□□□□ -0.13
VTI1B-201ENST00000216456 TMEM243Q9BU79 118 aa14.25□□□□□ -0.13
VTI1B-201ENST00000216456 PKHD1L1Q86WI1 4243 aa14.24□□□□□ -0.13
VTI1B-201ENST00000216456 XKRY2A2RUG3 117 aa14.24□□□□□ -0.13
VTI1B-201ENST00000216456 TRGC1P0CF51 173 aa14.24□□□□□ -0.13
VTI1B-201ENST00000216456 NIT2Q9NQR4 276 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms