RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 LHBP01229 141 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 IGHV4-59P01825 116 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 CTSGP08311 255 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 P0C879 139 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 TNRC6BQ9UPQ9 1833 aaKnown RBP7.99□□□□□ -1.13
VCL-201ENST00000211998 E7EUB6 86 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 CCL24O00175 119 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 PROP1O75360 226 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 C9orf47Q6ZRZ4 202 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
VCL-201ENST00000211998 C9orf66Q5T8R8 295 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 HELZP42694 1942 aaKnown RBP7.99□□□□□ -1.13
VCL-201ENST00000211998 ZNF80P51504 273 aaPredicted RBP7.99□□□□□ -1.13
VCL-201ENST00000211998 RIF1Q5UIP0 2472 aaKnown RBP7.99□□□□□ -1.13
VCL-201ENST00000211998 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
VCL-201ENST00000211998 CACNA1BQ00975 2339 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 PDE6GP18545 87 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 IGLV11-55A0A075B6I3 123 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 CGB3P0DN86 165 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 MED14OSP0DP75 135 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 NOP10Q9NPE3 64 aaKnown RBP7.98□□□□□ -1.13
VCL-201ENST00000211998 ATP5EP56381 51 aaPredicted RBP7.98□□□□□ -1.13
VCL-201ENST00000211998 MDFICQ9P1T7 246 aa7.98□□□□□ -1.13
VCL-201ENST00000211998 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
VCL-201ENST00000211998 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
VCL-201ENST00000211998 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 SPRNQ5BIV9 151 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 IGHV3-30P01768 117 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 IGHV3-30-5P0DP03 117 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 PIK3CD-AS1Q5SR53 167 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 Q6ZQT7 251 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 NUP210Q8TEM1 1887 aaPredicted RBP7.97□□□□□ -1.13
VCL-201ENST00000211998 DSCAML1Q8TD84 2053 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 ABCA4P78363 2273 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 FRMPD3Q5JV73 1810 aa7.97□□□□□ -1.13
VCL-201ENST00000211998 SCXQ7RTU7 201 aa7.96□□□□□ -1.13
VCL-201ENST00000211998 U3KQK5 164 aa7.96□□□□□ -1.13
VCL-201ENST00000211998 SMIM26A0A096LP01 95 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 IGHV4-61A0A0C4DH41 118 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 IGLV2-23P01705 113 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 SLPIP03973 132 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 GRNP28799 593 aaKnown RBP7.96□□□□□ -1.14
VCL-201ENST00000211998 TMEM223A0PJW6 202 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 NDUFC1O43677 76 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 Q6ZPA2 131 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 C16orf74Q96GX8 76 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 K7EQD1 137 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 WT1P19544 449 aaPredicted RBP7.96□□□□□ -1.14
VCL-201ENST00000211998 UBE2BP63146 152 aa7.96□□□□□ -1.14
VCL-201ENST00000211998 OBSL1O75147 1896 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 ZNF407Q9C0G0 2248 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 IGHV7-81A0A0B4J1V7 117 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 BPY2O14599 106 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 PKDREJQ9NTG1 2253 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 DAZAP2Q15038 168 aaPredicted RBP7.95□□□□□ -1.14
VCL-201ENST00000211998 LINC00526Q96FQ7 95 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 DYSFO75923 2080 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 ETDCA0A1B0GVM5 59 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 USF3Q68DE3 2245 aa7.95□□□□□ -1.14
VCL-201ENST00000211998 IGLV10-54A0A075B6I4 117 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 CGB7P0DN87 165 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 SPRY4Q9C004 299 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 BLCAPP62952 87 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 PLCE1Q9P212 2302 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 ANAPC1Q9H1A4 1944 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 NOTCH3Q9UM47 2321 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 ZNF22P17026 224 aaPredicted RBP7.94□□□□□ -1.14
VCL-201ENST00000211998 BRWD1-AS2P59051 145 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 DEFB1P60022 68 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 DKK4Q9UBT3 224 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 IGHV4-30-2A0A087WSY4 118 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 GPR179Q6PRD1 2367 aa7.94□□□□□ -1.14
VCL-201ENST00000211998 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 TMEM89A2RUT3 159 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 H7C423 109 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 DIRC1Q969H9 104 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 LST1O00453 97 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 GTF3C1Q12789 2109 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 IGHV4-38-2P0DP08 117 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 ZGRF1Q86YA3 2104 aa7.93□□□□□ -1.14
VCL-201ENST00000211998 TIRAPP58753 221 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 NDUFB1O75438 58 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 AJUBAQ96IF1 538 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 NACAE9PAV3 2078 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 SPART-AS1P0CW21 52 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 SLURP1P55000 103 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 DEFB136Q30KP8 78 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 RETNQ9HD89 108 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 KLK5Q9Y337 293 aaPredicted RBP7.92□□□□□ -1.14
VCL-201ENST00000211998 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
VCL-201ENST00000211998 CRIP1P50238 77 aa7.91□□□□□ -1.14
VCL-201ENST00000211998 K7EMT4 169 aa7.91□□□□□ -1.14
VCL-201ENST00000211998 ADORA2A-AS1P86434 159 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms