RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 AZU1P20160 251 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 RIPPLY3P57055 190 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 CFAP126Q5VTH2 177 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 ZFP2Q6ZN57 461 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 TMEM263Q8WUH6 116 aaKnown RBP10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 M0R143 59 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 RHOHQ15669 191 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 Q6ZN92 141 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 DKK2Q9UBU2 259 aa10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 MRPS16Q9Y3D3 137 aaKnown RBP10.36□□□□□ -0.75
RTFDC1-201ENST00000023939 ERASQ7Z444 233 aa10.35□□□□□ -0.75
RTFDC1-201ENST00000023939 SCGB3A1Q96QR1 104 aa10.35□□□□□ -0.75
RTFDC1-201ENST00000023939 CYSLTR1Q9Y271 337 aa10.35□□□□□ -0.75
RTFDC1-201ENST00000023939 A0A087WX48 190 aa10.34□□□□□ -0.75
RTFDC1-201ENST00000023939 HNRNPA3P51991 378 aaKnown RBP10.34□□□□□ -0.75
RTFDC1-201ENST00000023939 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
RTFDC1-201ENST00000023939 C2orf88Q9BSF0 95 aa10.34□□□□□ -0.75
RTFDC1-201ENST00000023939 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
RTFDC1-201ENST00000023939 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 MRPL16Q9NX20 251 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 I3L3M4 83 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 DPM2O94777 84 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 COX8AP10176 69 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 SLC25A34Q6PIV7 304 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
RTFDC1-201ENST00000023939 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 EREGO14944 169 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 TSHBP01222 138 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 IGKCP01834 107 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
RTFDC1-201ENST00000023939 ANKRD39Q53RE8 183 aa10.31□□□□□ -0.76
RTFDC1-201ENST00000023939 TIMM17AQ99595 171 aa10.31□□□□□ -0.76
RTFDC1-201ENST00000023939 TEP1Q99973 2627 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-201ENST00000023939 PLAC8L1A1L4L8 177 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 WIPF1O43516 503 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 PLNP26678 52 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 Q6ZSN1 163 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 MRPL35Q9NZE8 188 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 IGHV3-73A0A0B4J1V6 119 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 F8VRH5 84 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 STPG4Q8N801 248 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 BAALCQ8WXS3 180 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 OVOL2Q9BRP0 275 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 TNFRSF18Q9Y5U5 241 aa10.3□□□□□ -0.76
RTFDC1-201ENST00000023939 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
RTFDC1-201ENST00000023939 DLEU1O43261 78 aa10.29□□□□□ -0.76
RTFDC1-201ENST00000023939 NACAE9PAV3 2078 aa10.29□□□□□ -0.76
RTFDC1-201ENST00000023939 F8P00451 2351 aa10.29□□□□□ -0.76
RTFDC1-201ENST00000023939 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 CIDEAO60543 219 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 P0DMU3 169 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 FAM231AP0DMU4 169 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 FAM231CP0DMU5 169 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 FGF6P10767 208 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
RTFDC1-201ENST00000023939 Q6ZTI0 123 aa10.27□□□□□ -0.76
RTFDC1-201ENST00000023939 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.76
RTFDC1-201ENST00000023939 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.76
RTFDC1-201ENST00000023939 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
RTFDC1-201ENST00000023939 TRBV10-1A0A0K0K1A3 114 aa10.26□□□□□ -0.77
RTFDC1-201ENST00000023939 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-201ENST00000023939 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-201ENST00000023939 NPSP0C0P6 89 aa10.25□□□□□ -0.77
RTFDC1-201ENST00000023939 PMVKQ15126 192 aa10.25□□□□□ -0.77
RTFDC1-201ENST00000023939 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
RTFDC1-201ENST00000023939 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 SIVA1O15304 175 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 Q9UF83 564 aa10.24□□□□□ -0.77
RTFDC1-201ENST00000023939 CRYBA4P53673 196 aa10.23□□□□□ -0.77
RTFDC1-201ENST00000023939 KRTAP24-1Q3LI83 254 aa10.23□□□□□ -0.77
RTFDC1-201ENST00000023939 TP73-AS1Q9UF72 201 aa10.23□□□□□ -0.77
RTFDC1-201ENST00000023939 K7EQD1 137 aa10.22□□□□□ -0.77
RTFDC1-201ENST00000023939 LINC00612Q8N6U2 182 aa10.22□□□□□ -0.77
RTFDC1-201ENST00000023939 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
RTFDC1-201ENST00000023939 TRBV7-3A0A075B6L6 115 aa10.21□□□□□ -0.77
RTFDC1-201ENST00000023939 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.77
RTFDC1-201ENST00000023939 NMUP48645 174 aa10.21□□□□□ -0.77
RTFDC1-201ENST00000023939 COL5A1-AS1Q5SY13 56 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms