RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Sval2Q99N75 144 aa11.47□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Nicn1Q9CQM0 213 aa11.47□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Q9DAL9 119 aa11.47□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Ighv1-4A0A075B5T4 117 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 KprpB2RUR4 657 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Gm17333C6EQI3 125 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Tmem200bD3Z0P8 284 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Vmn1r113G3UWI8 307 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Ins2P01326 110 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Hmx3P42581 356 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Npy1rQ04573 382 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Wdr83osQ6ZWX0 106 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Usmg5Q78IK2 58 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Tmem106cQ80VP8 260 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Ifna14Q810G3 189 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 COA4Q8BT51 87 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 AdtrpQ8C138 230 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 FuomQ8R2K1 153 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Olfr1202Q8VF98 309 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Olfr802Q8VGJ2 312 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Rasl11bQ922H7 247 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Rnf141Q99MB7 230 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 EppinQ9DA01 134 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Cir1Q9DA19 450 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Znf580Q9DB38 172 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Vmn1r54Q9EPB8 315 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Pard6aQ9Z101 346 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 BC067074F6RXI4 2391 aa11.46□□□□□ -0.57
Ercc1-201ENSMUST00000003645 Nf1Q04690 2841 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm5890A0A140LI04 305 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm572B1ARY8 399 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm17727E9Q4V7 109 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm5294J3QP53 216 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Chek1O35280 476 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Sdc1P18828 311 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Fgf7P36363 194 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Rnase12Q5GAM8 145 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Sdr39u1Q5M8N4 308 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Atpaf1Q811I0 324 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Rbm48Q8K2X2 371 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Slc37a1Q8R070 531 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Rab11fip5Q8R361 645 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr1444Q8VFX2 319 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Galnt11Q921L8 608 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Tex13bQ99MW5 186 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Necap1Q9CR95 275 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Shisa9Q9CZN4 424 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Tmem170aQ9D342 144 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Sdf2l1Q9ESP1 221 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Lsm4Q9QXA5 137 aaKnown RBP11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Mpdu1Q9R0Q9 247 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Sfrp4Q9Z1N6 351 aa11.45□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr1436A0PK57 315 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm9767G3X930 207 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm21732J3QM79 361 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm21921J3QNB5 361 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Ifna5P07349 189 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Bmp5P49003 452 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 HrkP62816 92 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 RhogP84096 191 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Fbln7Q501P1 440 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr1371Q7TQT7 311 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm9961Q8BNV2 113 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Smco3Q8BQM7 225 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Cd99Q8VCN6 175 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Rbmxl1Q91VM5 388 aaKnown RBP11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Scgb1b27Q91WB5 92 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Ms4a6bQ99N09 244 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Cxcr6Q9EQ16 351 aa11.44□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm8797A0A0A6YW67 77 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr1189A2AV11 306 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Rnf212bD3Z423 297 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Nkx2-8O70584 235 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 PmchP56942 165 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 MiaQ61865 130 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Fam206aQ80ZQ9 193 aaKnown RBP11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Klre1Q8CJC7 226 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 GgactQ923B0 149 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Tceal8Q9CZY2 117 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Dmrtc1c1Q9D410 238 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Mlst8Q9DCJ1 326 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Tnfrsf13bQ9ET35 249 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Usp9yF8VPU6 2556 aa11.43□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Mgst2A2RST1 147 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Amn1B8JKV0 258 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr978E9Q985 311 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm20825J3QM67 227 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 P01659 112 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 P01788 123 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Bmpr1bP36898 502 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Eif5aP63242 154 aaKnown RBP11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Ssty2Q149W4 227 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Arrdc5Q497K5 325 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm21394Q497R7 227 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Srsf2Q62093 221 aaKnown RBP11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Gm20854Q62461 227 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 IrgcQ8C262 412 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Mmp28Q8CGV8 520 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr981Q8VEU2 310 aa11.42□□□□□ -0.58
Ercc1-201ENSMUST00000003645 Olfr1475Q8VEV6 314 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms