RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
LINC02228-204ENST00000642115 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 LINC01587Q99440 93 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
LINC02228-204ENST00000642115 ATP6V0E1O15342 81 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 TCF15Q12870 199 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
LINC02228-204ENST00000642115 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 DUSP14O95147 198 aaKnown RBP11.9□□□□□ -0.5
LINC02228-204ENST00000642115 ATP5J2P56134 94 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 PRR9Q5T870 116 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
LINC02228-204ENST00000642115 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
LINC02228-204ENST00000642115 LGALS9O00182 355 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
LINC02228-204ENST00000642115 MSRB2Q9Y3D2 182 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 TSHBP01222 138 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 HERVK_113P61574 105 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZNF56Q15929 161 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 METTL26Q96S19 204 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM126AQ9H061 195 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZFHX3Q15911 3703 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
LINC02228-204ENST00000642115 Q1RN00 199 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 AMELXQ99217 191 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 H3BMM0 161 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 Q8N9W7 124 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 IGHV3OR16-10A0A075B7F0 116 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 ODF3BA8MYP8 253 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 P0DMU3 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 FAM231AP0DMU4 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 FAM231CP0DMU5 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
LINC02228-204ENST00000642115 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 SORL1Q92673 2214 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 F6UB75 175 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
LINC02228-204ENST00000642115 LOC107984640A0A0U1RRK4 108 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 GNRH2O43555 120 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
LINC02228-204ENST00000642115 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 CCL21O00585 134 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 CDSNQ15517 529 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 NRGNQ92686 78 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 J3QQQ9 107 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 M0R1W7 72 aa11.83□□□□□ -0.52
LINC02228-204ENST00000642115 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
LINC02228-204ENST00000642115 TRIAP1O43715 76 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 FAM110DQ8TAY7 271 aaPredicted RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 F5H697 171 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 Q8N6K4 173 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 PMVKQ15126 192 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 H7C423 109 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
LINC02228-204ENST00000642115 LINC01600Q96MT4 127 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 JPT2Q9H910 190 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
LINC02228-204ENST00000642115 SAA4P35542 130 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
LINC02228-204ENST00000642115 DNAJC30Q96LL9 226 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 A0A087WWL8 130 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms