RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TRAV12-2A0A075B6T6 113 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 TRBV12-3P01733 135 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 PLA2G1BP04054 148 aaKnown RBP4.2□□□□□ -1.74
CHD2-227ENST00000637572 EGR2P11161 476 aaPredicted RBP4.2□□□□□ -1.74
CHD2-227ENST00000637572 PLNP26678 52 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 SMAD5-AS1Q9Y6J3 95 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 TMEM213A2RRL7 107 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 COX6CP09669 75 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 EVI2AP22794 236 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
CHD2-227ENST00000637572 TNCP24821 2201 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 TRBV25-1A0A075B6N4 114 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 SMIM9A6NGZ8 99 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 SPART-AS1P0CW21 52 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 MEIG1Q5JSS6 88 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
CHD2-227ENST00000637572 F6UB75 175 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 K7EN84 100 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 NCR2O95944 276 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 UBE2DNLQ8IWF7 75 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 FAM19A2Q8N3H0 131 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 PRO1933Q9H354 126 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 DNAH14Q0VDD8 3507 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 VAMP3Q15836 100 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 DNLZQ5SXM8 178 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 ZNF503Q96F45 646 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 MAP6D1Q9H9H5 199 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 F5H768 121 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 IGKCP01834 107 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 MRPL51Q4U2R6 128 aaKnown RBP4.19□□□□□ -1.74
CHD2-227ENST00000637572 NDUFAF3Q9BU61 184 aa4.19□□□□□ -1.74
CHD2-227ENST00000637572 TRAV9-2A0A087WT02 112 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 GAGE12BA1L429 117 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 SDHAF1A6NFY7 115 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 GAGE7O76087 117 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 RAB37Q96AX2 223 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 PLEKHB2Q96CS7 222 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 NBEAQ8NFP9 2946 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 IGKV3OR2-268A0A0C4DH90 116 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 APOMO95445 188 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 IGHV3-53P01767 116 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 CTRLP40313 264 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 RPL13AP40429 203 aaKnown RBP4.18□□□□□ -1.74
CHD2-227ENST00000637572 GTF2H5Q6ZYL4 71 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 APRG1Q8IVJ8 170 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 IL17DQ8TAD2 202 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 C18orf32Q8TCD1 76 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 PIFOQ8TCI5 191 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.743e-9■□□□□ 9.6
CHD2-227ENST00000637572 PRR31Q5SQ13 230 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 TMEM263Q8WUH6 116 aaKnown RBP4.18□□□□□ -1.74
CHD2-227ENST00000637572 GSN-AS1Q9NRJ2 163 aa4.18□□□□□ -1.74
CHD2-227ENST00000637572 IGHV3-73A0A0B4J1V6 119 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 C19orf71A6NCJ1 209 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 ATP5G1P05496 136 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 PSMB2P49721 201 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 SS18Q15532 418 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 COL5A1-AS1Q5SY13 56 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 GFI1BQ5VTD9 330 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 LINC00518Q8N0U6 118 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 RASL10AQ92737 203 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 RMI2Q96E14 147 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 Q8N2B8 174 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 PRAC2D3DTV9 90 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 H3BMM0 161 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 PAX4O43316 350 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 SIGLEC8Q9NYZ4 499 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 CBY1Q9Y3M2 126 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 MLST8Q9BVC4 326 aa4.17□□□□□ -1.74
CHD2-227ENST00000637572 NOP10Q9NPE3 64 aaKnown RBP4.17□□□□□ -1.74
CHD2-227ENST00000637572 BOD1L1Q8NFC6 3051 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GNRH2O43555 120 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 DAZ2Q13117 558 aaKnown RBP4.16□□□□□ -1.74
CHD2-227ENST00000637572 MRPL23Q16540 153 aaKnown RBP4.16□□□□□ -1.74
CHD2-227ENST00000637572 C2orf66Q6UXQ4 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 DAZ4Q86SG3 579 aaKnown RBP4.16□□□□□ -1.74
CHD2-227ENST00000637572 LINC00469Q8N7U9 141 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 DAZ3Q9NR90 486 aaKnown RBP4.16□□□□□ -1.74
CHD2-227ENST00000637572 IGHV1-24A0A0C4DH33 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 TRBV10-1A0A0K0K1A3 114 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GAGE12JA6NER3 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 DDTP30046 118 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GAGE1Q13065 139 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GAGE4Q13068 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GAGE5Q13069 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 GAGE13Q4V321 117 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 ZNRF2Q8NHG8 242 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 KIR2DL5BA0A0G2JN68 375 aa4.16□□□□□ -1.74
CHD2-227ENST00000637572 KIR2DL5BA0A0G2JPC4 375 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms