RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 RLFQ13129 1914 aa12.8□□□□□ -0.36
CACNA1A-238ENST00000637276 MALRD1Q5VYJ5 2156 aa12.8□□□□□ -0.36
CACNA1A-238ENST00000637276 QRFPP83859 136 aa12.8□□□□□ -0.36
CACNA1A-238ENST00000637276 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
CACNA1A-238ENST00000637276 POM121L12Q8N7R1 296 aa12.8□□□□□ -0.36
CACNA1A-238ENST00000637276 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 C12orf74Q32Q52 190 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 C16orf74Q96GX8 76 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 TRAV1-1A0A0B4J248 108 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 K7EM74 188 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 C11orf45Q8TAV5 145 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 NDUFA4L2Q9NRX3 87 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 K7EP13 123 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 NDUFA1O15239 70 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 SMIM20Q8N5G0 67 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 ZNF503-AS2A6NEH8 195 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 SMAD5-AS1Q9Y6J3 95 aa12.79□□□□□ -0.36
CACNA1A-238ENST00000637276 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
CACNA1A-238ENST00000637276 Q6ZS92 163 aa12.78□□□□□ -0.36
CACNA1A-238ENST00000637276 SPAG11BQ08648 103 aa12.78□□□□□ -0.36
CACNA1A-238ENST00000637276 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.36
CACNA1A-238ENST00000637276 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.36
CACNA1A-238ENST00000637276 IGLC7A0M8Q6 106 aa12.77□□□□□ -0.37
CACNA1A-238ENST00000637276 H3BRN7 92 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 K7EP34 96 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 SERTAD4-AS1Q5TG53 156 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 ZNF833PQ6ZTB9 187 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 CRYGDP07320 174 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 V9GYV3 84 aa12.76□□□□□ -0.37
CACNA1A-238ENST00000637276 NCOA6Q14686 2063 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 LINC00526Q96FQ7 95 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 F8W1H4 67 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 LOXL1Q08397 574 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 C3orf84H3BNL1 204 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 LOXP28300 417 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 Q6ZR03 302 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 THSD7AQ9UPZ6 1657 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
CACNA1A-238ENST00000637276 COX8AP10176 69 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 SPG11Q96JI7 2443 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 PDE6HQ13956 83 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 CT83Q5H943 113 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 K7EN84 100 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
CACNA1A-238ENST00000637276 CDPF1Q6NVV7 123 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 A4D1N5 150 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 RPL37AP8A6NKH3 93 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 CFC1BP0CG36 223 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 CFC1P0CG37 223 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 XAGE1AQ9HD64 81 aa12.73□□□□□ -0.37
CACNA1A-238ENST00000637276 IGLV2-8P01709 118 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 CRYGBP07316 175 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 WT1-ASQ06250 92 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 Q8NFD4 153 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 SPINK1P00995 79 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 Q0VG73 95 aa12.72□□□□□ -0.37
CACNA1A-238ENST00000637276 SIPA1L1O43166 1804 aa12.71□□□□□ -0.37
CACNA1A-238ENST00000637276 A0A0J9YXV3 536 aa12.71□□□□□ -0.37
CACNA1A-238ENST00000637276 F8VRH5 84 aa12.71□□□□□ -0.37
CACNA1A-238ENST00000637276 UBE2D2P62837 147 aa12.71□□□□□ -0.37
CACNA1A-238ENST00000637276 FXYD5Q96DB9 178 aa12.71□□□□□ -0.37
CACNA1A-238ENST00000637276 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.38
CACNA1A-238ENST00000637276 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.38
CACNA1A-238ENST00000637276 PLXNB1O43157 2135 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 Q8N1Y9 231 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 POU2AF1Q16633 256 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 MSRB1Q9NZV6 116 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 IGLV2-11P01706 119 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 PLA2G2EQ9NZK7 142 aa12.7□□□□□ -0.38
CACNA1A-238ENST00000637276 KIAA1549Q9HCM3 1950 aa12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 J3QLI3 93 aa12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
CACNA1A-238ENST00000637276 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 VWA8A3KMH1 1905 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 NANOS2P60321 138 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 C1orf158Q8N1D5 194 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 WFDC13Q8IUB5 93 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 FAM30AQ9NZY2 134 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 IGHV2-5P01817 119 aa12.68□□□□□ -0.38
CACNA1A-238ENST00000637276 DSCAMO60469 2012 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 TRBV6-6A0A0A6YYG2 114 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 LGALS9BQ3B8N2 356 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 LGALS9CQ6DKI2 356 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 Q6Q795 121 aa12.67□□□□□ -0.38
CACNA1A-238ENST00000637276 LINC00173Q6ZV60 143 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms