RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 STOML2Q9UJZ1 356 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 MED31Q9Y3C7 131 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 CREBBPQ92793 2442 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 A2MP01023 1474 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 GOLGA3Q08378 1498 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 PLCE1Q9P212 2302 aa-0.73□□□□□ -2.53
SRP54-214ENST00000630962 WDR97A6NE52 1622 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 PFDN1O60925 122 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 TCRAP04437 139 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 HIST1H1BP16401 226 aaKnown RBP-0.74□□□□□ -2.53
SRP54-214ENST00000630962 NPC2P61916 151 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 KRTAP19-8Q3LI54 63 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 CHMP6Q96FZ7 201 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 HOPXQ9BPY8 73 aaPredicted RBP-0.74□□□□□ -2.53
SRP54-214ENST00000630962 SLC35B3Q9H1N7 401 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 METTL1Q9UBP6 276 aaKnown RBP-0.74□□□□□ -2.53
SRP54-214ENST00000630962 KIF13AQ9H1H9 1805 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 CCDC171Q6TFL3 1326 aa-0.74□□□□□ -2.53
SRP54-214ENST00000630962 AKAP11Q9UKA4 1901 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 TRAV1-2A0A0B4J238 106 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 LOC730098B7Z3J9 87 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 G3V318 75 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 K7EQZ3 153 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 FAM107AO95990 144 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 RPL22P35268 128 aaKnown RBP-0.75□□□□□ -2.53
SRP54-214ENST00000630962 PSPHP78330 225 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 HSD17B12Q53GQ0 312 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 SNX29P2Q8IUI4 249 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 HERC1Q15751 4861 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 ZNF142P52746 1687 aaPredicted RBP-0.75□□□□□ -2.53
SRP54-214ENST00000630962 PLXNA2O75051 1894 aa-0.75□□□□□ -2.53
SRP54-214ENST00000630962 FXYD6-FXYD2A0A087WZ82 144 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 TRBV10-3A0A0K0K1G6 114 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 POLR2HP52434 150 aaKnown RBP-0.76□□□□□ -2.53
SRP54-214ENST00000630962 NDUFA11Q86Y39 141 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 DYNLRB2Q8TF09 96 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 THEM6Q8WUY1 208 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 GID8Q9NWU2 228 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 ERG28Q9UKR5 140 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 NOP16Q9Y3C1 178 aaKnown RBP-0.76□□□□□ -2.53
SRP54-214ENST00000630962 SYNMO15061 1565 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 KDM5CP41229 1560 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 CASZ1Q86V15 1759 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 ATRQ13535 2644 aa-0.76□□□□□ -2.53
SRP54-214ENST00000630962 PHIPQ8WWQ0 1821 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 KMT2CQ8NEZ4 4911 aaKnown RBP-0.77□□□□□ -2.53
SRP54-214ENST00000630962 ARHGAP31Q2M1Z3 1444 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 TRAV2A0A0B4J234 112 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 TRAV12-3A0A0B4J271 114 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 A0A1W2PRE2 83 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 E7EQ34 232 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 NPFFO15130 113 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 RPL7P18124 248 aaKnown RBP-0.77□□□□□ -2.53
SRP54-214ENST00000630962 MRPS15P82914 257 aaKnown RBP-0.77□□□□□ -2.53
SRP54-214ENST00000630962 SPCS2Q15005 226 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 TMEM78Q5T7P6 136 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 TRIQKQ629K1 86 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 NPVFQ9HCQ7 196 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 CALML5Q9NZT1 146 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 SPCS1Q9Y6A9 102 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 SPTA1P02549 2419 aa-0.77□□□□□ -2.53
SRP54-214ENST00000630962 TGP01266 2768 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 PTPRMP28827 1452 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 EP300Q09472 2414 aaPredicted RBP-0.78□□□□□ -2.53
SRP54-214ENST00000630962 BORCS7-ASMTA0A0B4J1R7 106 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 APOC4-APOC2K7ER74 178 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 HAMPP81172 84 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 GVINP1Q7Z2Y8 2422 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 NRXN2Q9P2S2 1712 aa-0.78□□□□□ -2.53
SRP54-214ENST00000630962 USF3Q68DE3 2245 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 ARAP1Q96P48 1450 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 EIF3AQ14152 1382 aaKnown RBP-0.79□□□□□ -2.54
SRP54-214ENST00000630962 MED23Q9ULK4 1368 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 CNOT1A5YKK6 2376 aaKnown RBP-0.79□□□□□ -2.54
SRP54-214ENST00000630962 PIN1P1O15428 100 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 RBP4P02753 201 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 EDDM3BP56851 147 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 CCDC115Q96NT0 180 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 BOLA2Q9H3K6 86 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 SCN3BQ9NY72 215 aa-0.79□□□□□ -2.54
SRP54-214ENST00000630962 BCL9LQ86UU0 1499 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 C10orf71Q711Q0 1435 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 ARFGEF1Q9Y6D6 1849 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 FAM92AA1XBS5 289 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 CCDC179H3BU77 68 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 J3QLW9 94 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 CLLU1Q5K131 121 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 ATP6V0E2Q8NHE4 81 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 BANF2Q9H503 90 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 DNAJC15Q9Y5T4 150 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.8□□□□□ -2.54
SRP54-214ENST00000630962 CHD8Q9HCK8 2581 aa-0.8□□□□□ -2.54
SRP54-214ENST00000630962 M0R2P5 195 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 BCE1O60756 84 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 SMIM24O75264 130 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 MT-ND4LP03901 98 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 PAEPP09466 180 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 SMIM6P0DI80 62 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 CFAP126Q5VTH2 177 aa-0.81□□□□□ -2.54
SRP54-214ENST00000630962 TMEM91Q6ZNR0 172 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms