RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 INMT-MINDY4F8WBC2 141 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 MT1HL1P0DM35 61 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 DGAT2L7PQ6IED9 249 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 ARL2-SNX15V9GYD0 113 aa10.08□□□□□ -0.8
PDLIM3-213ENST00000629667 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
PDLIM3-213ENST00000629667 TRBV10-1A0A0K0K1A3 114 aa10.07□□□□□ -0.8
PDLIM3-213ENST00000629667 SSNA1O43805 119 aa10.07□□□□□ -0.8
PDLIM3-213ENST00000629667 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
PDLIM3-213ENST00000629667 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
PDLIM3-213ENST00000629667 M0R036 132 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 M0R381 172 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 CXorf1O96002 111 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 ANGP03950 147 aaKnown RBP10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 UBE2D3P61077 147 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 UBE2D2P62837 147 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 Q6ZRU5 148 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
PDLIM3-213ENST00000629667 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 A0A0D9SG52 128 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 GRIFINA4D1Z8 144 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 PRSS1P07477 247 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
PDLIM3-213ENST00000629667 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 IFNA7P01567 189 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 MBP02144 154 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 MIAQ16674 131 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 S100ZQ8WXG8 99 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 PSMG3Q9BT73 122 aaPredicted RBP10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 NDUFA13Q9P0J0 144 aa10.04□□□□□ -0.8
PDLIM3-213ENST00000629667 CRIP1P50238 77 aa10.03□□□□□ -0.8
PDLIM3-213ENST00000629667 Q86TA4 180 aa10.03□□□□□ -0.8
PDLIM3-213ENST00000629667 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
PDLIM3-213ENST00000629667 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
PDLIM3-213ENST00000629667 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
PDLIM3-213ENST00000629667 PANO1I0J062 215 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 PEX7O00628 323 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 SH2D1AO60880 128 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 UPK1BO75841 260 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 ATP6V0CP27449 155 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 PKIAP61925 76 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 RPL19P84098 196 aaKnown RBP10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 SERF2P84101 59 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 LINC00299Q6ZSB3 139 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
PDLIM3-213ENST00000629667 TMSB15BA0A087X1C1 80 aa10.01□□□□□ -0.81
PDLIM3-213ENST00000629667 PTTG1O95997 202 aa10.01□□□□□ -0.81
PDLIM3-213ENST00000629667 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
PDLIM3-213ENST00000629667 SDIM1Q6ZPB5 146 aa10.01□□□□□ -0.81
PDLIM3-213ENST00000629667 LRP2P98164 4655 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 UBE2G2P60604 165 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 RAB4BP61018 213 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 CLPSL2Q6UWE3 100 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 DPH3Q96FX2 82 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 TNFSF18Q9UNG2 199 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 ZFP30Q9Y2G7 519 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 RNF213Q63HN8 5207 aa10□□□□□ -0.81
PDLIM3-213ENST00000629667 ZNF56Q15929 161 aa9.99□□□□□ -0.81
PDLIM3-213ENST00000629667 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
PDLIM3-213ENST00000629667 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
PDLIM3-213ENST00000629667 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
PDLIM3-213ENST00000629667 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
PDLIM3-213ENST00000629667 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
PDLIM3-213ENST00000629667 COX8CQ7Z4L0 72 aa9.98□□□□□ -0.81
PDLIM3-213ENST00000629667 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
PDLIM3-213ENST00000629667 PRR34Q9NV39 138 aa9.98□□□□□ -0.81
PDLIM3-213ENST00000629667 TNXBP22105 4242 aa9.98□□□□□ -0.81
PDLIM3-213ENST00000629667 UBE2G1P62253 170 aa9.97□□□□□ -0.81
PDLIM3-213ENST00000629667 IFITM3Q01628 133 aa9.97□□□□□ -0.81
PDLIM3-213ENST00000629667 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
PDLIM3-213ENST00000629667 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
PDLIM3-213ENST00000629667 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
PDLIM3-213ENST00000629667 FAM74A7A6NL05 159 aa9.96□□□□□ -0.82
PDLIM3-213ENST00000629667 RBX1P62877 108 aa9.96□□□□□ -0.82
PDLIM3-213ENST00000629667 CIRBPQ14011 172 aaKnown RBP9.96□□□□□ -0.82
PDLIM3-213ENST00000629667 KRTAP26-1Q6PEX3 210 aa9.96□□□□□ -0.82
PDLIM3-213ENST00000629667 FMC1Q96HJ9 113 aa9.96□□□□□ -0.82
PDLIM3-213ENST00000629667 CTXND1A0A1B0GTU2 59 aa9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 hDV102S1A0JD36 115 aa9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 GAGE6Q13070 117 aa9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 PRR27Q6MZM9 219 aa9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 AQP10Q96PS8 301 aa9.95□□□□□ -0.82
PDLIM3-213ENST00000629667 IGLV10-54A0A075B6I4 117 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 IGHV3-64A0A075B6Q5 118 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 A0A087WYN8 130 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 A6NHS1 94 aa9.94□□□□□ -0.82
PDLIM3-213ENST00000629667 F5H697 171 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms