RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 UBE2D1P51668 147 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
GABRB3-216ENST00000628124 K7EIM0 57 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 SPRY2O43597 315 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 FAM215AQ9Y5M1 114 aa6.88□□□□□ -1.31
GABRB3-216ENST00000628124 CNOT1A5YKK6 2376 aaKnown RBP6.88□□□□□ -1.31
GABRB3-216ENST00000628124 SMIM9A6NGZ8 99 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 SCN10AQ9Y5Y9 1956 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 CASP8AP2Q9UKL3 1982 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 CTRLP40313 264 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 Q8N9W7 124 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 MDFICQ9P1T7 246 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 IGHV4-61A0A0C4DH41 118 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 TRBV6-1A0A0K0K1D8 114 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 LRCOL1A6NCL2 159 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 HILS1P60008 231 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 PATJQ8NI35 1801 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 TEX49A0A1B0GTD5 131 aa6.87□□□□□ -1.31
GABRB3-216ENST00000628124 MYOFQ9NZM1 2061 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 C5orf56Q8N8D9 126 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 CTSZQ9UBR2 303 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 ZNF236Q9UL36 1845 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 DOCK5Q9H7D0 1870 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 A6NED7 52 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 IGKV1-17P01599 117 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 LINC00322Q6ZN03 302 aaPredicted RBP6.86□□□□□ -1.31
GABRB3-216ENST00000628124 REG3AQ06141 175 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 KIAA2026Q5HYC2 2103 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 YLPM1P49750 1951 aaKnown RBP6.86□□□□□ -1.31
GABRB3-216ENST00000628124 IGHV4-38-2P0DP08 117 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 ASPHD1Q5U4P2 390 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 ZFAND2AQ8N6M9 145 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 UBE2D4Q9Y2X8 147 aa6.86□□□□□ -1.31
GABRB3-216ENST00000628124 DOCK7Q96N67 2140 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 MSRB1Q9NZV6 116 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 NDUFA11Q86Y39 141 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 BLCAPP62952 87 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 USF3Q68DE3 2245 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 THADAQ6YHU6 1953 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 IGHV4-30-2A0A087WSY4 118 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 COL18A1P39060 1754 aa6.85□□□□□ -1.31
GABRB3-216ENST00000628124 CRYGDP07320 174 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 WFDC10BQ8IUB3 73 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 CHD5Q8TDI0 1954 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 IGKV1D-37A0A075B6S9 117 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 A0A096LNI7 61 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 FAM19A3Q7Z5A8 133 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 SLX1AQ9BQ83 275 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 G3V4G9 280 aa6.84□□□□□ -1.31
GABRB3-216ENST00000628124 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.32
GABRB3-216ENST00000628124 ODF1Q14990 250 aa6.84□□□□□ -1.32
GABRB3-216ENST00000628124 A0A0J9YX75 114 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 ODF3Q96PU9 254 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 WT1P19544 449 aaPredicted RBP6.83□□□□□ -1.32
GABRB3-216ENST00000628124 NDUFV3P56181 108 aaKnown RBP6.83□□□□□ -1.32
GABRB3-216ENST00000628124 PROK2Q9HC23 129 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 DOCK11Q5JSL3 2073 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 TCL1BO95988 128 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 DHRS4-AS1Q9P1J3 65 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 ROS1P08922 2347 aa6.83□□□□□ -1.32
GABRB3-216ENST00000628124 IGLV3-1P01715 115 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 DAZAP2Q15038 168 aaPredicted RBP6.82□□□□□ -1.32
GABRB3-216ENST00000628124 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
GABRB3-216ENST00000628124 FER1L5A0AVI2 2057 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 DEFB4AO15263 64 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 SPRY4Q9C004 299 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 LINC01548A6NM66 108 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 WFDC11Q8NEX6 87 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 PARP14Q460N5 1801 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 ZNF503-AS2A6NEH8 195 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 SERP2Q8N6R1 65 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 LINC00173Q6ZV60 143 aa6.82□□□□□ -1.32
GABRB3-216ENST00000628124 CCKP06307 115 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 IGLC6P0CF74 106 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 ENHOQ6UWT2 76 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 UBE2D3P61077 147 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
GABRB3-216ENST00000628124 PATE2Q6UY27 113 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 PSME4Q14997 1843 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 MAP6D1Q9H9H5 199 aa6.81□□□□□ -1.32
GABRB3-216ENST00000628124 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 PKDREJQ9NTG1 2253 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 ATAD5Q96QE3 1844 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 DOCK6Q96HP0 2047 aa6.8□□□□□ -1.32
GABRB3-216ENST00000628124 LRRC37AA6NMS7 1700 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms