RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 HIST2H2BDQ6DRA6 164 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 DYNLRB2Q8TF09 96 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 MDFICQ9P1T7 246 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 DKK2Q9UBU2 259 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 HLA-DRB4X5D2U9 266 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 COX8AP10176 69 aa14.58□□□□□ -0.08
PCDHB11-202ENST00000624887 DEFB114Q30KQ6 69 aa14.58□□□□□ -0.08
PCDHB11-202ENST00000624887 OR4C5Q8NGB2 326 aa14.58□□□□□ -0.08
PCDHB11-202ENST00000624887 PRSS1P07477 247 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 ODF1Q14990 250 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 ORMDL2Q53FV1 153 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 C12orf54Q6X4T0 127 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 RAX2Q96IS3 184 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 JPT2Q9H910 190 aa14.57□□□□□ -0.08
PCDHB11-202ENST00000624887 H3BMM0 161 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 NUDT3O95989 172 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 Q6ZVH6 145 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 ZMAT4Q9H898 229 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 TMEM160Q9NX00 188 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 TAX1BP3O14907 124 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 RNASE1P07998 156 aaKnown RBP14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 BVES-AS1Q5T3Y7 98 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 SYT8Q8NBV8 401 aa14.56□□□□□ -0.08
PCDHB11-202ENST00000624887 FHL3Q13643 280 aa14.55□□□□□ -0.08
PCDHB11-202ENST00000624887 MPV17L2Q567V2 206 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 SMR3AQ99954 134 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 A0A087WWL8 130 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 CD28P10747 220 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 RPL32P62910 135 aaKnown RBP14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 SCGB2A2Q13296 93 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 COTL1Q14019 142 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 CD300EQ496F6 205 aaPredicted RBP14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 C16orf95Q9H693 158 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 MAP6D1Q9H9H5 199 aa14.54□□□□□ -0.08
PCDHB11-202ENST00000624887 TRGV11A0A075B6L2 103 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1A1P0DJD3 496 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1CP0DJD4 496 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1FQ15415 496 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 C11orf44Q8N8P7 122 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 SPAG8Q99932 426 aaPredicted RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 NF1P21359 2839 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 ACANP16112 2415 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1BA6NDE4 496 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1EA6NEQ0 496 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 RBMY1DP0C7P1 496 aaKnown RBP14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 LINC01006Q8NI28 216 aa14.53□□□□□ -0.08
PCDHB11-202ENST00000624887 CCL24O00175 119 aa14.52□□□□□ -0.09
PCDHB11-202ENST00000624887 FGF6P10767 208 aa14.52□□□□□ -0.09
PCDHB11-202ENST00000624887 VAMP3Q15836 100 aa14.52□□□□□ -0.09
PCDHB11-202ENST00000624887 TOMM6Q96B49 74 aa14.52□□□□□ -0.09
PCDHB11-202ENST00000624887 CSTL1Q9H114 145 aa14.52□□□□□ -0.09
PCDHB11-202ENST00000624887 CUBNO60494 3623 aa14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 A0A1W2PRX2 142 aa14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 ZNF256Q9Y2P7 627 aaPredicted RBP14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 ANK3Q12955 4377 aaKnown RBP14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 LY6G6DO95868 133 aa14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 HHLA3Q9XRX5 114 aa14.51□□□□□ -0.09
PCDHB11-202ENST00000624887 TRAV25A0A0B4J276 109 aa14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 CBY3A6NI87 242 aa14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 F5H697 171 aa14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 IGKCP01834 107 aa14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 CRYGDP07320 174 aa14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 CITED2Q99967 270 aaPredicted RBP14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 TSSC4Q9Y5U2 329 aaPredicted RBP14.5□□□□□ -0.09
PCDHB11-202ENST00000624887 DPM2O94777 84 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 POLR2KP53803 58 aaKnown RBP14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 C2orf91Q6ZV80 131 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 BOD1L2Q8IYS8 172 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 ZNF876PQ49A33 203 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 FAM74A4Q5TZK3 123 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 SCGB3A1Q96QR1 104 aa14.49□□□□□ -0.09
PCDHB11-202ENST00000624887 A0A087WX48 190 aa14.48□□□□□ -0.09
PCDHB11-202ENST00000624887 ZNF418Q8TF45 676 aaPredicted RBP14.48□□□□□ -0.09
PCDHB11-202ENST00000624887 TRAV12-1A0A0B4J245 112 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 C2orf66Q6UXQ4 117 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 VCYO14598 125 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 HILS1P60008 231 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 CST9LQ9H4G1 147 aa14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 MRPL35Q9NZE8 188 aaKnown RBP14.47□□□□□ -0.09
PCDHB11-202ENST00000624887 ZNF56Q15929 161 aa14.46□□□□□ -0.09
PCDHB11-202ENST00000624887 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
PCDHB11-202ENST00000624887 CLUHP3Q96NS8 147 aa14.46□□□□□ -0.09
PCDHB11-202ENST00000624887 M0QY20 66 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 TCTAP57738 103 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 OCIAD2Q56VL3 154 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 SDHAF1A6NFY7 115 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 NMUP48645 174 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 SEC11AP67812 179 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 ODF3L2Q3SX64 289 aa14.45□□□□□ -0.1
PCDHB11-202ENST00000624887 TRBV27A0A0K0K1C4 114 aa14.44□□□□□ -0.1
PCDHB11-202ENST00000624887 HTN1P15515 57 aa14.44□□□□□ -0.1
PCDHB11-202ENST00000624887 KIR2DL4Q99706 377 aa14.44□□□□□ -0.1
PCDHB11-202ENST00000624887 OTOGQ6ZRI0 2925 aa14.44□□□□□ -0.1
PCDHB11-202ENST00000624887 SIVA1O15304 175 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 MORN3Q6PF18 240 aaPredicted RBP14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 ERASQ7Z444 233 aa14.43□□□□□ -0.1
PCDHB11-202ENST00000624887 PCP2Q8IVA1 136 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms