RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 TRBV7-1A0A0A6YYK4 115 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 LINC01548A6NM66 108 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 G3V318 75 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 GNLYP22749 145 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 C16orf92Q96LL3 132 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 SIRPDQ9H106 197 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 TNFRSF18Q9Y5U5 241 aa6.64□□□□□ -1.35
VCL-207ENST00000624354 ANKRD17O75179 2603 aaKnown RBP6.64□□□□□ -1.35
VCL-207ENST00000624354 H7C1H1 209 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 UBE2E1P51965 193 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 F8VRH5 84 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 IFITM1P13164 125 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 ORMDL2Q53FV1 153 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 BRI3O95415 125 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 ANKRD29Q8N6D5 301 aa6.63□□□□□ -1.35
VCL-207ENST00000624354 SAA4P35542 130 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 UBE2D3P61077 147 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 UBE2D2P62837 147 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 SRSF9Q13242 221 aaKnown RBP eCLIP6.62□□□□□ -1.35
VCL-207ENST00000624354 Q6ZQT7 251 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 SCGB3A1Q96QR1 104 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 LENEPQ9Y5L5 61 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 TCL1BO95988 128 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 S100A4P26447 101 aaKnown RBP6.62□□□□□ -1.35
VCL-207ENST00000624354 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 KLK15Q9H2R5 256 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 U3KQE9 123 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 WNK1Q9H4A3 2382 aa6.62□□□□□ -1.35
VCL-207ENST00000624354 J3KRW8 73 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 M0R381 172 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 LGALS1P09382 135 aaKnown RBP6.61□□□□□ -1.35
VCL-207ENST00000624354 ASIPP42127 132 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SUMO2P61956 95 aaKnown RBP6.61□□□□□ -1.35
VCL-207ENST00000624354 AJUBAQ96IF1 538 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 TGFAP01135 160 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SLC25A16P16260 332 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SBSPONQ8IVN8 264 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 TRAV21A0A0B4J279 112 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 CENPVL3A0A0U1RRI6 287 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 UBE2D1P51668 147 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 ADORA2A-AS1P86434 159 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 PRR9Q5T870 116 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 HIST2H2BCQ6DN03 193 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 TOMM6Q96B49 74 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 SPANXA1Q9NS26 97 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
VCL-207ENST00000624354 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 DPH3P1Q9H4G8 78 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 PRRC2AP48634 2157 aaKnown RBP6.6□□□□□ -1.35
VCL-207ENST00000624354 KLRB1Q12918 225 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 FAM159AQ6UWV7 190 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 OR10J6PQ8NGY7 276 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 PHLDA3Q9Y5J5 127 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 MYO9AB2RTY4 2548 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 ZNF815PA8K554 130 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 RASL10AQ92737 203 aa6.6□□□□□ -1.35
VCL-207ENST00000624354 TEP1Q99973 2627 aaKnown RBP6.6□□□□□ -1.35
VCL-207ENST00000624354 SPRY2O43597 315 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 IGF1P05019 195 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 C14orf178Q8N769 122 aaPredicted RBP6.59□□□□□ -1.35
VCL-207ENST00000624354 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 NEXN-AS1Q8NBZ9 246 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 YAE1D1Q9NRH1 226 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 OVOL1O14753 267 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 MGPP08493 103 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 Q6Q795 121 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 ITLN2Q8WWU7 325 aaPredicted RBP6.59□□□□□ -1.35
VCL-207ENST00000624354 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
VCL-207ENST00000624354 TRAV41A0A0B4J266 112 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 FAM223BA6NKX1 122 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 NPFFO15130 113 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 CRLF1O75462 422 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 NDUFA11Q86Y39 141 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 FAM223AQ8IWN6 122 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 RPL39LQ96EH5 51 aaKnown RBP6.58□□□□□ -1.36
VCL-207ENST00000624354 SLC25A20O43772 301 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 PPP1R17O96001 155 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 PRADC1Q9BSG0 188 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 NRGNQ92686 78 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
VCL-207ENST00000624354 C9JAW5 83 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 CD7P09564 240 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 UCNP55089 124 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 TMEM219Q86XT9 240 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 MED14OSP0DP75 135 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 MOB4Q9Y3A3 225 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 TEX15Q9BXT5 2789 aa6.57□□□□□ -1.36
VCL-207ENST00000624354 RNASE4P34096 147 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms