RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 C10orf105Q8TEF2 133 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 DAD1P61803 113 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 Q8N1Y9 231 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 A0A1B0GXF2 115 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 A0A087WW49 117 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 IGLL5B9A064 214 aa12.41□□□□□ -0.42
GABRB3-215ENST00000622697 CTRLP40313 264 aa12.4□□□□□ -0.42
GABRB3-215ENST00000622697 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.42
GABRB3-215ENST00000622697 TNRC6AQ8NDV7 1962 aaKnown RBP12.4□□□□□ -0.42
GABRB3-215ENST00000622697 CARD19Q96LW7 228 aa12.4□□□□□ -0.42
GABRB3-215ENST00000622697 TEX48A0A1B0GUV7 120 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 RHOHQ15669 191 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 EDA2RQ9HAV5 297 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 TP53TG3Q9ULZ0 132 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 NTN5Q8WTR8 489 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-215ENST00000622697 Q9H8V8 135 aa12.39□□□□□ -0.43
GABRB3-215ENST00000622697 C10orf142B7Z368 130 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 GHRHP01286 108 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 CCL24O00175 119 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 CFC1P0CG37 223 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 HERVK_113P63121 156 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
GABRB3-215ENST00000622697 BAALCQ8WXS3 180 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 A0A0J9YY99 117 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 ODF1Q14990 250 aa12.37□□□□□ -0.43
GABRB3-215ENST00000622697 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
GABRB3-215ENST00000622697 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-215ENST00000622697 DSCAML1Q8TD84 2053 aa12.36□□□□□ -0.43
GABRB3-215ENST00000622697 XCL1P47992 114 aa12.36□□□□□ -0.43
GABRB3-215ENST00000622697 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
GABRB3-215ENST00000622697 DAND5Q8N907 189 aa12.36□□□□□ -0.43
GABRB3-215ENST00000622697 OPRPNQ99935 248 aaPredicted RBP12.36□□□□□ -0.43
GABRB3-215ENST00000622697 BOD1L2Q8IYS8 172 aa12.35□□□□□ -0.43
GABRB3-215ENST00000622697 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
GABRB3-215ENST00000622697 WFDC2Q14508 124 aa12.35□□□□□ -0.43
GABRB3-215ENST00000622697 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
GABRB3-215ENST00000622697 ANGP03950 147 aaKnown RBP12.35□□□□□ -0.43
GABRB3-215ENST00000622697 A4D1N5 150 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 IGF1P05019 195 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 HCFC1P51610 2035 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 C5orf38Q86SI9 138 aa12.34□□□□□ -0.43
GABRB3-215ENST00000622697 IGHG2P01859 326 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 Q6ZQT7 251 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 TOMM6Q96B49 74 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 RS1O15537 224 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 FBXL19-AS1Q494R0 122 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 C11orf86A6NJI1 115 aa12.33□□□□□ -0.44
GABRB3-215ENST00000622697 CRIP1P50238 77 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 DEFB113Q30KQ7 82 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 DNAJC30Q96LL9 226 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 LMO4P61968 165 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 CRYGBP07316 175 aa12.32□□□□□ -0.44
GABRB3-215ENST00000622697 IGF2RP11717 2491 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 ATRXP46100 2492 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 SOCS3O14543 225 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
GABRB3-215ENST00000622697 CEMP1Q6PRD7 247 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-215ENST00000622697 TRAV12-1A0A0B4J245 112 aa12.29□□□□□ -0.44
GABRB3-215ENST00000622697 INAFM2P0DMQ5 153 aa12.29□□□□□ -0.44
GABRB3-215ENST00000622697 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
GABRB3-215ENST00000622697 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
GABRB3-215ENST00000622697 TRAV13-2A0A0B4J235 113 aa12.28□□□□□ -0.44
GABRB3-215ENST00000622697 E9PLD3 99 aa12.28□□□□□ -0.44
GABRB3-215ENST00000622697 PSCAO43653 123 aa12.28□□□□□ -0.44
GABRB3-215ENST00000622697 K7EMT4 169 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 P0DMU3 169 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 FAM231AP0DMU4 169 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 FAM231CP0DMU5 169 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 ARHGAP32A7KAX9 2087 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 IGLV10-54A0A075B6I4 117 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 A6NDX4 124 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 IGLC6P0CF74 106 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 C20orf173Q96LM9 149 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 HIGD1BQ9P298 99 aa12.27□□□□□ -0.44
GABRB3-215ENST00000622697 LRP4O75096 1905 aa12.27□□□□□ -0.45
GABRB3-215ENST00000622697 C15orf53Q8NAA6 179 aa12.27□□□□□ -0.45
GABRB3-215ENST00000622697 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.45
GABRB3-215ENST00000622697 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 J3QKU1 62 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 K7EQD1 137 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 C9orf153Q5TBE3 101 aa12.26□□□□□ -0.45
GABRB3-215ENST00000622697 TMEM61Q8N0U2 210 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms