RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
PTCHD3-202ENST00000622555 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 M0R2P5 195 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 MIFP14174 115 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 CAMPP49913 170 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 DMRTA1Q5VZB9 504 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 SYT8Q8NBV8 401 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 IL17DQ8TAD2 202 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
PTCHD3-202ENST00000622555 IGHV4-4A0A075B6R2 117 aa12.8□□□□□ -0.36
PTCHD3-202ENST00000622555 IGHV4-28A0A0C4DH34 117 aa12.8□□□□□ -0.36
PTCHD3-202ENST00000622555 SERF1AO75920 110 aa12.8□□□□□ -0.36
PTCHD3-202ENST00000622555 CDPF1Q6NVV7 123 aa12.8□□□□□ -0.36
PTCHD3-202ENST00000622555 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
PTCHD3-202ENST00000622555 A0A1B0GW15 77 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 NXPH4O95158 308 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 SRIP30626 198 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 DEFA6Q01524 100 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 SPATA25Q9BR10 227 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 Q8NAQ8 132 aa12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 MRPL16Q9NX20 251 aaKnown RBP12.79□□□□□ -0.36
PTCHD3-202ENST00000622555 DEFB4AO15263 64 aa12.78□□□□□ -0.36
PTCHD3-202ENST00000622555 TM2D3Q9BRN9 247 aa12.78□□□□□ -0.36
PTCHD3-202ENST00000622555 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
PTCHD3-202ENST00000622555 TRGV1A0A0A0MS02 117 aa12.77□□□□□ -0.36
PTCHD3-202ENST00000622555 C18orf32Q8TCD1 76 aa12.77□□□□□ -0.36
PTCHD3-202ENST00000622555 PTH2Q96A98 100 aa12.76□□□□□ -0.37
PTCHD3-202ENST00000622555 Q6ZTI0 123 aa12.76□□□□□ -0.37
PTCHD3-202ENST00000622555 SMIM15Q7Z3B0 74 aa12.76□□□□□ -0.37
PTCHD3-202ENST00000622555 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
PTCHD3-202ENST00000622555 LGALS9BQ3B8N2 356 aa12.75□□□□□ -0.37
PTCHD3-202ENST00000622555 RASL10AQ92737 203 aa12.75□□□□□ -0.37
PTCHD3-202ENST00000622555 B9D2Q9BPU9 175 aa12.75□□□□□ -0.37
PTCHD3-202ENST00000622555 JPT2Q9H910 190 aa12.75□□□□□ -0.37
PTCHD3-202ENST00000622555 EVI2AP22794 236 aa12.74□□□□□ -0.37
PTCHD3-202ENST00000622555 PIK3CD-AS1Q5SR53 167 aa12.74□□□□□ -0.37
PTCHD3-202ENST00000622555 ZMAT4Q9H898 229 aa12.74□□□□□ -0.37
PTCHD3-202ENST00000622555 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
PTCHD3-202ENST00000622555 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
PTCHD3-202ENST00000622555 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 GAGE12BA1L429 117 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 GAGE7O76087 117 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 GAGE12FP0CL80 117 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 GAGE12GP0CL81 117 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 GAGE12IP0CL82 117 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 NDUFAF3Q9BU61 184 aa12.73□□□□□ -0.37
PTCHD3-202ENST00000622555 TENM3Q9P273 2699 aa12.72□□□□□ -0.37
PTCHD3-202ENST00000622555 A0A087WWL8 130 aa12.72□□□□□ -0.37
PTCHD3-202ENST00000622555 LYRM9A8MSI8 78 aa12.72□□□□□ -0.37
PTCHD3-202ENST00000622555 A8MWV9 139 aa12.72□□□□□ -0.37
PTCHD3-202ENST00000622555 SMIM17P0DL12 118 aa12.72□□□□□ -0.37
PTCHD3-202ENST00000622555 IQCJQ1A5X6 159 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 FAM74A4Q5TZK3 123 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 AMN1Q8IY45 258 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 SAMD10Q9BYL1 202 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 DKK2Q9UBU2 259 aa12.71□□□□□ -0.37
PTCHD3-202ENST00000622555 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.38
PTCHD3-202ENST00000622555 DEFB130BP0DP73 79 aa12.71□□□□□ -0.38
PTCHD3-202ENST00000622555 DEFB130AP0DP74 79 aa12.71□□□□□ -0.38
PTCHD3-202ENST00000622555 C11orf68Q9H3H3 251 aaKnown RBP12.71□□□□□ -0.38
PTCHD3-202ENST00000622555 MGPP08493 103 aa12.7□□□□□ -0.38
PTCHD3-202ENST00000622555 CFAP126Q5VTH2 177 aa12.7□□□□□ -0.38
PTCHD3-202ENST00000622555 FAM104BQ5XKR9 115 aa12.7□□□□□ -0.38
PTCHD3-202ENST00000622555 CELA1Q9UNI1 258 aa12.7□□□□□ -0.38
PTCHD3-202ENST00000622555 RS1O15537 224 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 CRYGDP07320 174 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 SPART-AS1P0CW21 52 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 CTAG1AP78358 180 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 LINC00612Q8N6U2 182 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 MEGF8Q7Z7M0 2845 aa12.69□□□□□ -0.38
PTCHD3-202ENST00000622555 A0A0J9YWU9 116 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 POM121L12Q8N7R1 296 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 TRAV4A0A0B4J268 109 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 IGHV3-53P01767 116 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 RAB4AP20338 218 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 NIT1Q86X76 327 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 RNF185Q96GF1 192 aa12.68□□□□□ -0.38
PTCHD3-202ENST00000622555 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 F5H697 171 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 AMTP48728 403 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 DAD1P61803 113 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 PKIAP61925 76 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 ZNF56Q15929 161 aa12.67□□□□□ -0.38
PTCHD3-202ENST00000622555 RHODO00212 210 aa12.66□□□□□ -0.38
PTCHD3-202ENST00000622555 LINC00315P59091 139 aa12.66□□□□□ -0.38
PTCHD3-202ENST00000622555 MRPL51Q4U2R6 128 aaKnown RBP12.66□□□□□ -0.38
PTCHD3-202ENST00000622555 ZNF479Q96JC4 524 aa12.66□□□□□ -0.38
PTCHD3-202ENST00000622555 U3KQK5 164 aa12.66□□□□□ -0.38
PTCHD3-202ENST00000622555 UFSP1Q6NVU6 142 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms