RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 IGHG4P01861 327 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 C10orf99Q6UWK7 81 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 SMR3AQ99954 134 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 MUC22E2RYF6 1773 aaPredicted RBP7.12□□□□□ -1.27
GGA3-223ENST00000621870 ZNF292O60281 2723 aa7.12□□□□□ -1.27
GGA3-223ENST00000621870 H3BUT2 72 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 NPYP01303 97 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 PAX2Q02962 417 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 SMIM2Q9BVW6 85 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 MUC3AQ02505 3323 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 DLEU1O43261 78 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 CRLF1O75462 422 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 NXPH4O95158 308 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 ATP5G1P05496 136 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 Q6ZQT7 251 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 DEFB125Q8N687 156 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 STPG4Q8N801 248 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 FREM2Q5SZK8 3169 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 TMEM89A2RUT3 159 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 C1orf229Q6ZS94 237 aaPredicted RBP7.11□□□□□ -1.27
GGA3-223ENST00000621870 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
GGA3-223ENST00000621870 IGKV2D-24A0A075B6R9 120 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 A0A1W2PPR1 153 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 CRIP3Q6Q6R5 217 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 LINC00574Q9H8X3 128 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 KMT2EQ8IZD2 1858 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 TEP1Q99973 2627 aaKnown RBP7.1□□□□□ -1.27
GGA3-223ENST00000621870 GYPEP15421 78 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 HCFC1P51610 2035 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 INS-IGF2F8WCM5 200 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 LTAP01374 205 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 FAM167A-AS1Q96KT0 104 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
GGA3-223ENST00000621870 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
GGA3-223ENST00000621870 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
GGA3-223ENST00000621870 MSRB1Q9NZV6 116 aa7.09□□□□□ -1.27
GGA3-223ENST00000621870 INSL3P51460 131 aa7.09□□□□□ -1.27
GGA3-223ENST00000621870 Q8N8P6 123 aa7.09□□□□□ -1.27
GGA3-223ENST00000621870 A0A1B0GV72 72 aa7.09□□□□□ -1.28
GGA3-223ENST00000621870 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.28
GGA3-223ENST00000621870 CCL18P55774 89 aa7.09□□□□□ -1.28
GGA3-223ENST00000621870 Q8N1Y9 231 aa7.09□□□□□ -1.28
GGA3-223ENST00000621870 MYO15AQ9UKN7 3530 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 K7EN84 100 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 ERG28Q9UKR5 140 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 RBAKDNA6NC62 111 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 FSTL3O95633 263 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 IGF1P05019 195 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 XCL1P47992 114 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 SIGLEC8Q9NYZ4 499 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 WI2-2373I1.2A0A1W2PRP0 233 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 PMVKQ15126 192 aa7.08□□□□□ -1.28
GGA3-223ENST00000621870 MRPL23Q16540 153 aaKnown RBP7.08□□□□□ -1.28
GGA3-223ENST00000621870 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.07□□□□□ -1.28
GGA3-223ENST00000621870 IGKV2-29A2NJV5 120 aaPredicted RBP7.07□□□□□ -1.28
GGA3-223ENST00000621870 AVPP01185 164 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 GHRHP01286 108 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 ORAOV1Q8WV07 137 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 IGLV10-54A0A075B6I4 117 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 IGHV1-24A0A0C4DH33 117 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 LINC01006Q8NI28 216 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 CITED1Q99966 193 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 A0A087X0K7 114 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 RMI2Q96E14 147 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 C16orf74Q96GX8 76 aa7.07□□□□□ -1.28
GGA3-223ENST00000621870 LRP4O75096 1905 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 SMIM27A0A1W2PRY6 76 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 ESDP10768 282 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 C1orf43Q9BWL3 253 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 MAP1AP78559 2803 aaPredicted RBP7.06□□□□□ -1.28
GGA3-223ENST00000621870 ZNF479Q96JC4 524 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 POLR3KQ9Y2Y1 108 aaPredicted RBP7.06□□□□□ -1.28
GGA3-223ENST00000621870 A0A0J9YX75 114 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 Q0VG73 95 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 SHISA2Q6UWI4 295 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 C5orf38Q86SI9 138 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 NDUFA11Q86Y39 141 aa7.06□□□□□ -1.28
GGA3-223ENST00000621870 IGLL1P15814 213 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 HSD52Q0P140 79 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
GGA3-223ENST00000621870 IGKV1D-37A0A075B6S9 117 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 IGHV3-30P01768 117 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 IGHV3-33P01772 117 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 IGHV3-30-3P0DP02 117 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 IGHV3-30-5P0DP03 117 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 EBI3Q14213 229 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 RNF152Q8N8N0 203 aa7.05□□□□□ -1.28
GGA3-223ENST00000621870 RPL39LQ96EH5 51 aaKnown RBP7.05□□□□□ -1.28
GGA3-223ENST00000621870 MAP6D1Q9H9H5 199 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms