RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.9
MUC1-229ENST00000620770 BORCS7Q96B45 105 aa9.46□□□□□ -0.9
MUC1-229ENST00000620770 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
MUC1-229ENST00000620770 RHODO00212 210 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 PAX4O43316 350 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 MT-ND4LP03901 98 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 NTF3P20783 257 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 TWIST1Q15672 202 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 GFRA4Q9GZZ7 299 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 PRO0255Q9UI72 69 aa9.45□□□□□ -0.9
MUC1-229ENST00000620770 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 MGPP08493 103 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 SMIM17P0DL12 118 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
MUC1-229ENST00000620770 CRYBA4P53673 196 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 ZNF56Q15929 161 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 NUP35Q8NFH5 326 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 VSIG2Q96IQ7 327 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 FAM210BQ96KR6 192 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
MUC1-229ENST00000620770 CARHSP1Q9Y2V2 147 aaKnown RBP9.44□□□□□ -0.9
MUC1-229ENST00000620770 LOC100131303A0A0U1RQF7 123 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 LY6G6CO95867 125 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 APOC3P02656 99 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 CRYGDP07320 174 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 SLAQ13239 276 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 NDUFA5Q16718 116 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 Q6ZSN1 163 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 SLC25A29Q8N8R3 303 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 NAT8BQ9UHF3 227 aa9.43□□□□□ -0.9
MUC1-229ENST00000620770 A0A096LPF7 62 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 A0A1B0GUT8 65 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 F5H697 171 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 GYPEP15421 78 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 EVI2AP22794 236 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 C10orf91Q5T1B1 145 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 ANAPC16Q96DE5 110 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 CNFNQ9BYD5 112 aa9.42□□□□□ -0.9
MUC1-229ENST00000620770 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 K7EQD1 137 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 CIDEAO60543 219 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
MUC1-229ENST00000620770 TCTAP57738 103 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 RHOHQ15669 191 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 SMIM15Q7Z3B0 74 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 PRADC1Q9BSG0 188 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
MUC1-229ENST00000620770 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 P0DMU3 169 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 FAM231AP0DMU4 169 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 FAM231CP0DMU5 169 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 RIGQ13278 110 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 MRPL54Q6P161 138 aaKnown RBP9.4□□□□□ -0.9
MUC1-229ENST00000620770 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 KIF25-AS1Q9Y6Z4 181 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 BIRC6Q9NR09 4857 aa9.4□□□□□ -0.9
MUC1-229ENST00000620770 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 H3BNG1 76 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 SRIP30626 198 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
MUC1-229ENST00000620770 GAGE1Q13065 139 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 GAGE4Q13068 117 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 GAGE5Q13069 117 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 CTDSP1Q9GZU7 261 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 RPS10P5Q9NQ39 176 aa9.39□□□□□ -0.91
MUC1-229ENST00000620770 CAMPP49913 170 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 LINC00315P59091 139 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 RAB4BP61018 213 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 RHEBQ15382 184 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
MUC1-229ENST00000620770 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 SVBPQ8N300 66 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 Q9UF83 564 aa9.38□□□□□ -0.91
MUC1-229ENST00000620770 SNAPINO95295 136 aa9.37□□□□□ -0.91
MUC1-229ENST00000620770 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
MUC1-229ENST00000620770 HBBP68871 147 aa9.36□□□□□ -0.91
MUC1-229ENST00000620770 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
MUC1-229ENST00000620770 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
MUC1-229ENST00000620770 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
MUC1-229ENST00000620770 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
MUC1-229ENST00000620770 ZNRF2Q8NHG8 242 aa9.35□□□□□ -0.91
MUC1-229ENST00000620770 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
MUC1-229ENST00000620770 A0A087WWC5 75 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 A0A1B0GW15 77 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 A0A1B0GXF2 115 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 H7C1H1 209 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 S100PP25815 95 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 CCL18P55774 89 aa9.34□□□□□ -0.91
MUC1-229ENST00000620770 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms