RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SCRT2Q9NQ03 307 aa11.52□□□□□ -0.57
HMGN3-203ENST00000620514 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
HMGN3-203ENST00000620514 Q9HAA7 133 aa11.51□□□□□ -0.57
HMGN3-203ENST00000620514 A0A087WWL8 130 aa11.5□□□□□ -0.57
HMGN3-203ENST00000620514 M0R381 172 aa11.5□□□□□ -0.57
HMGN3-203ENST00000620514 TPT1P13693 172 aaKnown RBP11.5□□□□□ -0.57
HMGN3-203ENST00000620514 FAM74A4Q5TZK3 123 aa11.5□□□□□ -0.57
HMGN3-203ENST00000620514 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
HMGN3-203ENST00000620514 PHLDA3Q9Y5J5 127 aa11.5□□□□□ -0.57
HMGN3-203ENST00000620514 RHODO00212 210 aa11.49□□□□□ -0.57
HMGN3-203ENST00000620514 H2AFB1P0C5Y9 115 aa11.49□□□□□ -0.57
HMGN3-203ENST00000620514 KRTAP10-1P60331 282 aa11.49□□□□□ -0.57
HMGN3-203ENST00000620514 RPL19P84098 196 aaKnown RBP11.49□□□□□ -0.57
HMGN3-203ENST00000620514 SFRP2Q96HF1 295 aa11.49□□□□□ -0.57
HMGN3-203ENST00000620514 LRCOL1A6NCL2 159 aa11.48□□□□□ -0.57
HMGN3-203ENST00000620514 PSCAO43653 123 aa11.48□□□□□ -0.57
HMGN3-203ENST00000620514 PFDN1O60925 122 aa11.48□□□□□ -0.57
HMGN3-203ENST00000620514 S100A9P06702 114 aaKnown RBP11.47□□□□□ -0.57
HMGN3-203ENST00000620514 EIF5AP63241 154 aaKnown RBP11.47□□□□□ -0.57
HMGN3-203ENST00000620514 CCL20P78556 96 aa11.47□□□□□ -0.57
HMGN3-203ENST00000620514 BAGE2Q86Y30 109 aa11.47□□□□□ -0.57
HMGN3-203ENST00000620514 MLST8Q9BVC4 326 aa11.47□□□□□ -0.57
HMGN3-203ENST00000620514 XGP55808 180 aa11.46□□□□□ -0.57
HMGN3-203ENST00000620514 ZFP82Q8N141 532 aa11.46□□□□□ -0.57
HMGN3-203ENST00000620514 DAZ4Q86SG3 579 aaKnown RBP11.45□□□□□ -0.58
HMGN3-203ENST00000620514 DAZ3Q9NR90 486 aaKnown RBP11.45□□□□□ -0.58
HMGN3-203ENST00000620514 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
HMGN3-203ENST00000620514 OR10AG1Q8NH19 301 aa11.44□□□□□ -0.58
HMGN3-203ENST00000620514 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
HMGN3-203ENST00000620514 MUC21A0A0G2JKD1 596 aa11.43□□□□□ -0.58
HMGN3-203ENST00000620514 MUC21A0A140T8X8 626 aa11.43□□□□□ -0.58
HMGN3-203ENST00000620514 GCSHP23434 173 aa11.43□□□□□ -0.58
HMGN3-203ENST00000620514 RPL35P42766 123 aaKnown RBP11.43□□□□□ -0.58
HMGN3-203ENST00000620514 LAGE3Q14657 143 aa11.43□□□□□ -0.58
HMGN3-203ENST00000620514 DERL1Q9BUN8 251 aa11.43□□□□□ -0.58
HMGN3-203ENST00000620514 A0A087WWC5 75 aa11.42□□□□□ -0.58
HMGN3-203ENST00000620514 CXCL1P09341 107 aa11.42□□□□□ -0.58
HMGN3-203ENST00000620514 WFDC2Q14508 124 aa11.42□□□□□ -0.58
HMGN3-203ENST00000620514 Q8N814 137 aa11.42□□□□□ -0.58
HMGN3-203ENST00000620514 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
HMGN3-203ENST00000620514 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
HMGN3-203ENST00000620514 SNAI2O43623 268 aa11.41□□□□□ -0.58
HMGN3-203ENST00000620514 C11orf52Q96A22 123 aa11.41□□□□□ -0.58
HMGN3-203ENST00000620514 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
HMGN3-203ENST00000620514 MANBALQ9NQG1 85 aa11.41□□□□□ -0.58
HMGN3-203ENST00000620514 FAT1Q14517 4588 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 UBE2D3P61077 147 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 SSTP61278 116 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 UBE2D2P62837 147 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
HMGN3-203ENST00000620514 NIT1Q86X76 327 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
HMGN3-203ENST00000620514 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
HMGN3-203ENST00000620514 SULT1A2P50226 295 aa11.39□□□□□ -0.59
HMGN3-203ENST00000620514 RAB5CP51148 216 aa11.39□□□□□ -0.59
HMGN3-203ENST00000620514 HAMPP81172 84 aa11.39□□□□□ -0.59
HMGN3-203ENST00000620514 ZNF56Q15929 161 aa11.39□□□□□ -0.59
HMGN3-203ENST00000620514 TCTE3Q8IZS6 198 aa11.39□□□□□ -0.59
HMGN3-203ENST00000620514 NTN5Q8WTR8 489 aaPredicted RBP11.39□□□□□ -0.59
HMGN3-203ENST00000620514 TRBV7-3A0A075B6L6 115 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 EPM2AB3EWF7 344 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 LECT2O14960 151 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 OR5AL1P0C617 328 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 RAB4BP61018 213 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 CENPWQ5EE01 88 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 SPANXN1Q5VSR9 72 aa11.38□□□□□ -0.59
HMGN3-203ENST00000620514 RAB19A4D1S5 217 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 GZMBP10144 247 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 TOR2AQ5JU69 321 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 EIF5AL1Q6IS14 154 aaKnown RBP11.37□□□□□ -0.59
HMGN3-203ENST00000620514 NEXN-AS1Q8NBZ9 246 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 OR10G8Q8NGN5 311 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 KLK12Q9UKR0 248 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 URGCP-MRPS24S4R325 110 aa11.37□□□□□ -0.59
HMGN3-203ENST00000620514 RBFOX3A6NFN3 312 aa11.36□□□□□ -0.59
HMGN3-203ENST00000620514 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
HMGN3-203ENST00000620514 TEX46H3BTG2 121 aa11.35□□□□□ -0.59
HMGN3-203ENST00000620514 SMR3BP02814 79 aaPredicted RBP11.35□□□□□ -0.59
HMGN3-203ENST00000620514 BAALCQ8WXS3 180 aa11.35□□□□□ -0.59
HMGN3-203ENST00000620514 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
HMGN3-203ENST00000620514 A0A087WX48 190 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 F5H697 171 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 C1QBP02746 253 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 MEF2BQ02080 365 aaPredicted RBP11.34□□□□□ -0.59
HMGN3-203ENST00000620514 Q5VSD8 79 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 Q6ZNX1 250 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 SLC51BQ86UW2 128 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 UBE2WQ96B02 151 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
HMGN3-203ENST00000620514 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 IGKV2D-24A0A075B6R9 120 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 TRBV6-8A0A0A6YYG3 113 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 IGLC6P0CF74 106 aa11.33□□□□□ -0.6
HMGN3-203ENST00000620514 GNG4P50150 75 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms