RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SNRPD3P62318 126 aaKnown RBP15.86■□□□□ 0.13
SGMS1-210ENST00000619438 NHLRC4P0CG21 123 aaPredicted RBP15.85■□□□□ 0.13
SGMS1-210ENST00000619438 MRAP2Q96G30 205 aa15.85■□□□□ 0.13
SGMS1-210ENST00000619438 J3KRW8 73 aa15.84■□□□□ 0.13
SGMS1-210ENST00000619438 IGHV4-30-4P0DP06 118 aa15.84■□□□□ 0.13
SGMS1-210ENST00000619438 TMEM61Q8N0U2 210 aa15.84■□□□□ 0.13
SGMS1-210ENST00000619438 Q8N8P6 123 aa15.84■□□□□ 0.13
SGMS1-210ENST00000619438 GAS8-AS1O95177 125 aa15.83■□□□□ 0.13
SGMS1-210ENST00000619438 S100A4P26447 101 aaKnown RBP15.83■□□□□ 0.13
SGMS1-210ENST00000619438 LEPP41159 167 aa15.83■□□□□ 0.13
SGMS1-210ENST00000619438 WFDC3Q8IUB2 231 aa15.83■□□□□ 0.13
SGMS1-210ENST00000619438 NRACQ8N912 160 aa15.83■□□□□ 0.13
SGMS1-210ENST00000619438 IGLV2-18A0A075B6J9 118 aa15.83■□□□□ 0.12
SGMS1-210ENST00000619438 A0A0J9YX75 114 aa15.83■□□□□ 0.12
SGMS1-210ENST00000619438 NXPH4O95158 308 aa15.83■□□□□ 0.12
SGMS1-210ENST00000619438 MRPS16Q9Y3D3 137 aaKnown RBP15.83■□□□□ 0.12
SGMS1-210ENST00000619438 A0A1B0GV90 55 aa15.82■□□□□ 0.12
SGMS1-210ENST00000619438 LGALS9BQ3B8N2 356 aa15.82■□□□□ 0.12
SGMS1-210ENST00000619438 LGALS9CQ6DKI2 356 aa15.82■□□□□ 0.12
SGMS1-210ENST00000619438 Q6ZN92 141 aa15.82■□□□□ 0.12
SGMS1-210ENST00000619438 DNAH9Q9NYC9 4486 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 HSBP1L1C9JCN9 74 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 RNASE3P12724 160 aaKnown RBP15.81■□□□□ 0.12
SGMS1-210ENST00000619438 FCER1GP30273 86 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 HNRNPA3P51991 378 aaKnown RBP15.81■□□□□ 0.12
SGMS1-210ENST00000619438 KIR3DS1Q14943 382 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 PSMG4Q5JS54 123 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 PHLDA3Q9Y5J5 127 aa15.81■□□□□ 0.12
SGMS1-210ENST00000619438 TRAV25A0A0B4J276 109 aa15.8■□□□□ 0.12
SGMS1-210ENST00000619438 CD7P09564 240 aa15.8■□□□□ 0.12
SGMS1-210ENST00000619438 ZNF688P0C7X2 276 aa15.8■□□□□ 0.12
SGMS1-210ENST00000619438 SBSPONQ8IVN8 264 aa15.8■□□□□ 0.12
SGMS1-210ENST00000619438 DUSP14O95147 198 aaKnown RBP15.79■□□□□ 0.12
SGMS1-210ENST00000619438 GATA1P15976 413 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-210ENST00000619438 TSPOP30536 169 aa15.79■□□□□ 0.12
SGMS1-210ENST00000619438 DPH3P1Q9H4G8 78 aa15.79■□□□□ 0.12
SGMS1-210ENST00000619438 TIMM8BQ9Y5J9 83 aaPredicted RBP15.79■□□□□ 0.12
SGMS1-210ENST00000619438 TRAV2A0A0B4J234 112 aa15.79■□□□□ 0.12
SGMS1-210ENST00000619438 C7orf71A4D174 169 aa15.79■□□□□ 0.12
SGMS1-210ENST00000619438 NUTF2P61970 127 aaKnown RBP15.79■□□□□ 0.12
SGMS1-210ENST00000619438 IFI27L1Q96BM0 104 aa15.79■□□□□ 0.12
SGMS1-210ENST00000619438 OR11H12B2RN74 326 aa15.78■□□□□ 0.12
SGMS1-210ENST00000619438 GNRH2O43555 120 aa15.78■□□□□ 0.12
SGMS1-210ENST00000619438 TFPI2P48307 235 aa15.78■□□□□ 0.12
SGMS1-210ENST00000619438 FAM159AQ6UWV7 190 aa15.78■□□□□ 0.12
SGMS1-210ENST00000619438 POM121L12Q8N7R1 296 aa15.78■□□□□ 0.12
SGMS1-210ENST00000619438 hDV102S1A0JD36 115 aa15.77■□□□□ 0.12
SGMS1-210ENST00000619438 A8MZ25 164 aa15.77■□□□□ 0.12
SGMS1-210ENST00000619438 M0R381 172 aa15.77■□□□□ 0.12
SGMS1-210ENST00000619438 FOXI2Q6ZQN5 318 aa15.77■□□□□ 0.12
SGMS1-210ENST00000619438 C19orf73Q9NVV2 129 aa15.77■□□□□ 0.12
SGMS1-210ENST00000619438 AP1S3Q96PC3 154 aa15.76■□□□□ 0.11
SGMS1-210ENST00000619438 SPAG8Q99932 426 aaPredicted RBP15.76■□□□□ 0.11
SGMS1-210ENST00000619438 ZMAT4Q9H898 229 aa15.76■□□□□ 0.11
SGMS1-210ENST00000619438 C20orf78Q9BR46 151 aa15.76■□□□□ 0.11
SGMS1-210ENST00000619438 H0Y8G0 127 aa15.75■□□□□ 0.11
SGMS1-210ENST00000619438 GOLT1BQ9Y3E0 138 aa15.75■□□□□ 0.11
SGMS1-210ENST00000619438 TRAV26-2A0A0B4J265 109 aa15.74■□□□□ 0.11
SGMS1-210ENST00000619438 K7EMI3 77 aa15.74■□□□□ 0.11
SGMS1-210ENST00000619438 A8MTW9 85 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 PPP1R17O96001 155 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 CDKN1BP46527 198 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 FXYD7P58549 80 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 WFDC10AQ9H1F0 79 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 TRAV12-3A0A0B4J271 114 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 LAGE3Q14657 143 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 PMCHL2Q9BQD1 86 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 SMIM2Q9BVW6 85 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 KIF25-AS1Q9Y6Z4 181 aa15.73■□□□□ 0.11
SGMS1-210ENST00000619438 SLC25A34Q6PIV7 304 aa15.72■□□□□ 0.11
SGMS1-210ENST00000619438 AMTNQ6UX39 209 aa15.72■□□□□ 0.11
SGMS1-210ENST00000619438 C14orf178Q8N769 122 aaPredicted RBP15.72■□□□□ 0.11
SGMS1-210ENST00000619438 RASL10AQ92737 203 aa15.72■□□□□ 0.11
SGMS1-210ENST00000619438 C9orf85Q96MD7 179 aa15.71■□□□□ 0.11
SGMS1-210ENST00000619438 COL5A1-AS1Q5SY13 56 aa15.7■□□□□ 0.1
SGMS1-210ENST00000619438 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
SGMS1-210ENST00000619438 ATP5LO75964 103 aa15.7■□□□□ 0.1
SGMS1-210ENST00000619438 LINC00315P59091 139 aa15.7■□□□□ 0.1
SGMS1-210ENST00000619438 SUMO2P61956 95 aaKnown RBP15.7■□□□□ 0.1
SGMS1-210ENST00000619438 TENM3Q9P273 2699 aa15.69■□□□□ 0.1
SGMS1-210ENST00000619438 IGHV1OR15-1A0A075B7D0 117 aa15.68■□□□□ 0.1
SGMS1-210ENST00000619438 SPRY2O43597 315 aa15.68■□□□□ 0.1
SGMS1-210ENST00000619438 SMIM17P0DL12 118 aa15.68■□□□□ 0.1
SGMS1-210ENST00000619438 COX8AP10176 69 aa15.68■□□□□ 0.1
SGMS1-210ENST00000619438 RPL32P62910 135 aaKnown RBP15.68■□□□□ 0.1
SGMS1-210ENST00000619438 RBMY1BA6NDE4 496 aaKnown RBP15.67■□□□□ 0.1
SGMS1-210ENST00000619438 RBMY1EA6NEQ0 496 aaKnown RBP15.67■□□□□ 0.1
SGMS1-210ENST00000619438 RBMY1DP0C7P1 496 aaKnown RBP15.67■□□□□ 0.1
SGMS1-210ENST00000619438 ORMDL2Q53FV1 153 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 LINC00469Q8N7U9 141 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 WWC2-AS2Q96NR7 200 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 TM2D3Q9BRN9 247 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 STAB2Q8WWQ8 2551 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 HLA-DRB4P13762 266 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 HLA-DRB4X5D2U9 266 aa15.67■□□□□ 0.1
SGMS1-210ENST00000619438 IGKV3-20P01619 116 aa15.66■□□□□ 0.1
SGMS1-210ENST00000619438 CMC4P56277 68 aaPredicted RBP15.66■□□□□ 0.1
SGMS1-210ENST00000619438 ODF1Q14990 250 aa15.66■□□□□ 0.1
SGMS1-210ENST00000619438 SPINK13Q1W4C9 94 aa15.66■□□□□ 0.1
SGMS1-210ENST00000619438 C18orf15Q96N68 181 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms