RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MIEN1Q9BRT3 115 aa14.01□□□□□ -0.17
PSPC1-206ENST00000619300 CBY3A6NI87 242 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 H0Y8G0 127 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 LINC01545Q5VT33 79 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 CLUHP3Q96NS8 147 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 C20orf78Q9BR46 151 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 JPT2Q9H910 190 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 SAP30O75446 220 aa14□□□□□ -0.17
PSPC1-206ENST00000619300 MCRIP2Q9BUT9 160 aaKnown RBP14□□□□□ -0.17
PSPC1-206ENST00000619300 PPP1R17O96001 155 aa13.99□□□□□ -0.17
PSPC1-206ENST00000619300 KRTAP10-3P60369 221 aa13.99□□□□□ -0.17
PSPC1-206ENST00000619300 WNK1Q9H4A3 2382 aa13.99□□□□□ -0.17
PSPC1-206ENST00000619300 SUMO2P61956 95 aaKnown RBP13.98□□□□□ -0.17
PSPC1-206ENST00000619300 NDUFA11Q86Y39 141 aa13.98□□□□□ -0.17
PSPC1-206ENST00000619300 RPL39LQ96EH5 51 aaKnown RBP13.98□□□□□ -0.17
PSPC1-206ENST00000619300 SMIM2Q9BVW6 85 aa13.98□□□□□ -0.17
PSPC1-206ENST00000619300 SETXQ7Z333 2677 aaKnown RBP13.98□□□□□ -0.17
PSPC1-206ENST00000619300 OR11H12B2RN74 326 aa13.98□□□□□ -0.17
PSPC1-206ENST00000619300 LAGE3Q14657 143 aa13.98□□□□□ -0.17
PSPC1-206ENST00000619300 IFI27L1Q96BM0 104 aa13.98□□□□□ -0.17
PSPC1-206ENST00000619300 A0A087WWL8 130 aa13.97□□□□□ -0.17
PSPC1-206ENST00000619300 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
PSPC1-206ENST00000619300 HTN1P15515 57 aa13.97□□□□□ -0.17
PSPC1-206ENST00000619300 STHQ8IWL8 128 aa13.97□□□□□ -0.17
PSPC1-206ENST00000619300 IGLV1-51P01701 117 aa13.96□□□□□ -0.17
PSPC1-206ENST00000619300 IGLC3P0DOY3 106 aa13.96□□□□□ -0.17
PSPC1-206ENST00000619300 IGLL1P15814 213 aa13.96□□□□□ -0.17
PSPC1-206ENST00000619300 CMC4P56277 68 aaPredicted RBP13.96□□□□□ -0.17
PSPC1-206ENST00000619300 GAGE1Q13065 139 aa13.96□□□□□ -0.17
PSPC1-206ENST00000619300 ZNF876PQ49A33 203 aa13.95□□□□□ -0.18
PSPC1-206ENST00000619300 PMCHL2Q9BQD1 86 aa13.95□□□□□ -0.18
PSPC1-206ENST00000619300 F5H697 171 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 INSP01308 110 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 CRYGDP07320 174 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 LGALS9BQ3B8N2 356 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 LGALS9CQ6DKI2 356 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 SUMO4Q6EEV6 95 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 C18orf15Q96N68 181 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 LINC01587Q99440 93 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 LINC00467Q9BRT7 94 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 UQCR10Q9UDW1 63 aa13.94□□□□□ -0.18
PSPC1-206ENST00000619300 CRLF1O75462 422 aa13.93□□□□□ -0.18
PSPC1-206ENST00000619300 TRPT1Q86TN4 253 aaKnown RBP13.93□□□□□ -0.18
PSPC1-206ENST00000619300 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
PSPC1-206ENST00000619300 K7EMI3 77 aa13.93□□□□□ -0.18
PSPC1-206ENST00000619300 FAM74A4Q5TZK3 123 aa13.93□□□□□ -0.18
PSPC1-206ENST00000619300 NSD1Q96L73 2696 aaPredicted RBP13.92□□□□□ -0.18
PSPC1-206ENST00000619300 hDV102S1A0JD36 115 aa13.92□□□□□ -0.18
PSPC1-206ENST00000619300 HSBP1L1C9JCN9 74 aa13.92□□□□□ -0.18
PSPC1-206ENST00000619300 PRM2P04554 102 aa13.92□□□□□ -0.18
PSPC1-206ENST00000619300 ORMDL2Q53FV1 153 aa13.92□□□□□ -0.18
PSPC1-206ENST00000619300 NUDT3O95989 172 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 CSTL1Q9H114 145 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 ST20Q9HBF5 79 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 XCL2Q9UBD3 114 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 RPL32P62910 135 aaKnown RBP13.91□□□□□ -0.18
PSPC1-206ENST00000619300 BEAN1Q3B7T3 259 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 FAM110AQ9BQ89 295 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 GOLT1BQ9Y3E0 138 aa13.91□□□□□ -0.18
PSPC1-206ENST00000619300 FN1P02751 2386 aaKnown RBP13.9□□□□□ -0.18
PSPC1-206ENST00000619300 DLEU1O43261 78 aa13.9□□□□□ -0.18
PSPC1-206ENST00000619300 ATP5LO75964 103 aa13.9□□□□□ -0.18
PSPC1-206ENST00000619300 PF4P02776 101 aa13.9□□□□□ -0.18
PSPC1-206ENST00000619300 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
PSPC1-206ENST00000619300 NIPBLQ6KC79 2804 aaeCLIP13.9□□□□□ -0.181e-5■□□□□ 11.1
PSPC1-206ENST00000619300 M0R2P5 195 aa13.89□□□□□ -0.19
PSPC1-206ENST00000619300 ZNF56Q15929 161 aa13.89□□□□□ -0.19
PSPC1-206ENST00000619300 M0QY20 66 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 PRSS1P07477 247 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 POLR2KP53803 58 aaKnown RBP13.88□□□□□ -0.19
PSPC1-206ENST00000619300 PIK3CD-AS1Q5SR53 167 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 PTH2Q96A98 100 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 TRBV6-5A0A0K0K1A5 114 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 ZNF25P17030 456 aaPredicted RBP13.88□□□□□ -0.19
PSPC1-206ENST00000619300 Q6ZN92 141 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 LINC00482Q8N8I6 264 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 C11orf72Q8NBR9 251 aa13.88□□□□□ -0.19
PSPC1-206ENST00000619300 VCYO14598 125 aa13.87□□□□□ -0.19
PSPC1-206ENST00000619300 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
PSPC1-206ENST00000619300 C1orf158Q8N1D5 194 aa13.86□□□□□ -0.19
PSPC1-206ENST00000619300 TOMM6Q96B49 74 aa13.86□□□□□ -0.19
PSPC1-206ENST00000619300 TMEM208Q9BTX3 173 aa13.86□□□□□ -0.19
PSPC1-206ENST00000619300 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
PSPC1-206ENST00000619300 SPXQ9BT56 116 aa13.86□□□□□ -0.19
PSPC1-206ENST00000619300 NEGR1Q7Z3B1 354 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 DKK2Q9UBU2 259 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 SDHAF1A6NFY7 115 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 A8MWV9 139 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 HNRNPA3P51991 378 aaKnown RBP13.85□□□□□ -0.19
PSPC1-206ENST00000619300 ODF1Q14990 250 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 COL5A1-AS1Q5SY13 56 aa13.85□□□□□ -0.19
PSPC1-206ENST00000619300 MORN3Q6PF18 240 aaPredicted RBP13.85□□□□□ -0.19
PSPC1-206ENST00000619300 G0S2P27469 103 aa13.84□□□□□ -0.19
PSPC1-206ENST00000619300 WFDC10AQ9H1F0 79 aa13.84□□□□□ -0.19
PSPC1-206ENST00000619300 TRBV27A0A0K0K1C4 114 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.83□□□□□ -0.2
PSPC1-206ENST00000619300 AZU1P20160 251 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 SCGB3A1Q96QR1 104 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 KIR2DL4Q99706 377 aa13.83□□□□□ -0.2
PSPC1-206ENST00000619300 ZMAT4Q9H898 229 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms