RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 SPANXB1Q9NS25 103 aaPredicted RBP11.22□□□□□ -0.61
PTPN9-206ENST00000618819 SBF2Q86WG5 1849 aa11.22□□□□□ -0.61
PTPN9-206ENST00000618819 TMEM263Q8WUH6 116 aaKnown RBP11.21□□□□□ -0.61
PTPN9-206ENST00000618819 DEFB4AO15263 64 aa11.21□□□□□ -0.61
PTPN9-206ENST00000618819 SP5Q6BEB4 398 aaPredicted RBP11.21□□□□□ -0.61
PTPN9-206ENST00000618819 CCL24O00175 119 aa11.21□□□□□ -0.62
PTPN9-206ENST00000618819 TRBV7-3A0A075B6L6 115 aa11.21□□□□□ -0.62
PTPN9-206ENST00000618819 CCDC179H3BU77 68 aa11.21□□□□□ -0.62
PTPN9-206ENST00000618819 HOXB4P17483 251 aaPredicted RBP11.2□□□□□ -0.62
PTPN9-206ENST00000618819 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 PRAC2D3DTV9 90 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 CCL18P55774 89 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 NDUFA7O95182 113 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 ABCA4P78363 2273 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 MIAQ16674 131 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
PTPN9-206ENST00000618819 PDE6GP18545 87 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 LENEPQ9Y5L5 61 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 RITA1Q96K30 269 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
PTPN9-206ENST00000618819 DEFB1P60022 68 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 GTF3C1Q12789 2109 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 PLA2G2EQ9NZK7 142 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 COL18A1P39060 1754 aa11.19□□□□□ -0.62
PTPN9-206ENST00000618819 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 B9D2Q9BPU9 175 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 SIRPDQ9H106 197 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 PROK2Q9HC23 129 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 TRPM7Q96QT4 1865 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 IGHV4-30-4P0DP06 118 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 IGHV4-31P0DP07 118 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
PTPN9-206ENST00000618819 M0QXV9 152 aa11.18□□□□□ -0.62
PTPN9-206ENST00000618819 THADAQ6YHU6 1953 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 IGKV2-24A0A0C4DH68 120 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 HRCT1Q6UXD1 115 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 RETNQ9HD89 108 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 LRCOL1A6NCL2 159 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 A0A0G2JMZ2 1700 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
PTPN9-206ENST00000618819 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
PTPN9-206ENST00000618819 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
PTPN9-206ENST00000618819 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
PTPN9-206ENST00000618819 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
PTPN9-206ENST00000618819 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 TRBV27A0A0K0K1C4 114 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
PTPN9-206ENST00000618819 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 CLUHP3Q96NS8 147 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 WDR81Q562E7 1941 aa11.15□□□□□ -0.62
PTPN9-206ENST00000618819 NHSL1Q5SYE7 1610 aa11.15□□□□□ -0.63
PTPN9-206ENST00000618819 I3L2K1 104 aa11.14□□□□□ -0.63
PTPN9-206ENST00000618819 H3BUA1 57 aa11.14□□□□□ -0.63
PTPN9-206ENST00000618819 Q6ZS92 163 aa11.14□□□□□ -0.63
PTPN9-206ENST00000618819 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 P0DMU3 169 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 FAM231AP0DMU4 169 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 FAM231CP0DMU5 169 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 COL4A1P02462 1669 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 RNF138Q8WVD3 245 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 RALGAPA2Q2PPJ7 1873 aa11.13□□□□□ -0.63
PTPN9-206ENST00000618819 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
PTPN9-206ENST00000618819 DSCAML1Q8TD84 2053 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 SPTBN2O15020 2390 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 K7EIM0 57 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 PMAIP1Q13794 54 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 PRSS33Q8NF86 280 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 BLCAPP62952 87 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
PTPN9-206ENST00000618819 WFDC13Q8IUB5 93 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 IGHV4-38-2P0DP08 117 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
PTPN9-206ENST00000618819 SERP2Q8N6R1 65 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 SERP1Q9Y6X1 66 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 SPRNQ5BIV9 151 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
PTPN9-206ENST00000618819 ATP5EP56381 51 aaPredicted RBP11.1□□□□□ -0.63
PTPN9-206ENST00000618819 TRIAP1O43715 76 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 C2orf70A6NJV1 201 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 CTSZQ9UBR2 303 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 J3QLI3 93 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 CTRLP40313 264 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 SOSTDC1Q6X4U4 206 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 GPHB5Q86YW7 130 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
PTPN9-206ENST00000618819 ATP5EP2Q5VTU8 51 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms