RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 Q8N9W7 124 aa11.37□□□□□ -0.59
SRRT-217ENST00000618411 TACC2O95359 2948 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 A0A0J9YX75 114 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 ARHGAP32A7KAX9 2087 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 FAM240AA0A1B0GVK7 77 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 OVOL1O14753 267 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
SRRT-217ENST00000618411 PCNX1Q96RV3 2341 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 M0R2P5 195 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 ECSCRQ19T08 205 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 EEF1AKMT3Q96AZ1 226 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 TNFRSF18Q9Y5U5 241 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 TRIOBPQ9H2D6 2365 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 GNRH2O43555 120 aa11.35□□□□□ -0.59
SRRT-217ENST00000618411 CNOT1A5YKK6 2376 aaKnown RBP11.34□□□□□ -0.59
SRRT-217ENST00000618411 TRBV7-1A0A0A6YYK4 115 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 H3BT86 120 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 TRIAP1O43715 76 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 FOXC1Q12948 553 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 TMEM126AQ9H061 195 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 IGHV1-69P01742 117 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 MINOS1-NBL1R4GNA1 71 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 CD3EP07766 207 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 APRG1Q8IVJ8 170 aa11.34□□□□□ -0.59
SRRT-217ENST00000618411 BEX4Q9NWD9 120 aaPredicted RBP11.34□□□□□ -0.59
SRRT-217ENST00000618411 BOD1L1Q8NFC6 3051 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 RNASE4P34096 147 aaKnown RBP11.33□□□□□ -0.6
SRRT-217ENST00000618411 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 H7C423 109 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 FAM19A4Q96LR4 140 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 ABCA4P78363 2273 aa11.33□□□□□ -0.6
SRRT-217ENST00000618411 TRBV6-5A0A0K0K1A5 114 aa11.32□□□□□ -0.6
SRRT-217ENST00000618411 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
SRRT-217ENST00000618411 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
SRRT-217ENST00000618411 MUC4Q99102 2169 aa11.32□□□□□ -0.6
SRRT-217ENST00000618411 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
SRRT-217ENST00000618411 ASPMQ8IZT6 3477 aa11.31□□□□□ -0.6
SRRT-217ENST00000618411 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
SRRT-217ENST00000618411 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
SRRT-217ENST00000618411 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
SRRT-217ENST00000618411 COX6CP09669 75 aa11.31□□□□□ -0.6
SRRT-217ENST00000618411 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
SRRT-217ENST00000618411 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.3□□□□□ -0.6
SRRT-217ENST00000618411 ZNF56Q15929 161 aa11.3□□□□□ -0.6
SRRT-217ENST00000618411 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
SRRT-217ENST00000618411 BRI3O95415 125 aa11.3□□□□□ -0.6
SRRT-217ENST00000618411 RHOHQ15669 191 aa11.3□□□□□ -0.6
SRRT-217ENST00000618411 F5H697 171 aa11.29□□□□□ -0.6
SRRT-217ENST00000618411 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
SRRT-217ENST00000618411 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
SRRT-217ENST00000618411 G3V318 75 aa11.29□□□□□ -0.6
SRRT-217ENST00000618411 SOCS3O14543 225 aa11.29□□□□□ -0.6
SRRT-217ENST00000618411 LINC01587Q99440 93 aa11.28□□□□□ -0.6
SRRT-217ENST00000618411 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
SRRT-217ENST00000618411 JPT2Q9H910 190 aa11.28□□□□□ -0.6
SRRT-217ENST00000618411 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
SRRT-217ENST00000618411 ADGRG4Q8IZF6 3080 aa11.28□□□□□ -0.6
SRRT-217ENST00000618411 IGHV3-64A0A075B6Q5 118 aa11.27□□□□□ -0.6
SRRT-217ENST00000618411 UBE2E1P51965 193 aa11.27□□□□□ -0.6
SRRT-217ENST00000618411 TMEM101Q96IK0 257 aa11.27□□□□□ -0.6
SRRT-217ENST00000618411 LITAFQ99732 161 aa11.27□□□□□ -0.6
SRRT-217ENST00000618411 IMUPQ9GZP8 106 aa11.27□□□□□ -0.61
SRRT-217ENST00000618411 A0A087WWL8 130 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 DEFB1P60022 68 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
SRRT-217ENST00000618411 LY6DQ14210 128 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 IGF2-ASQ6U949 168 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 LST1O00453 97 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 PRSS2P07478 247 aa11.26□□□□□ -0.61
SRRT-217ENST00000618411 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
SRRT-217ENST00000618411 SPANXCQ9NY87 97 aa11.25□□□□□ -0.61
SRRT-217ENST00000618411 C20orf203Q8NBC4 194 aa11.25□□□□□ -0.61
SRRT-217ENST00000618411 APC2O95996 2303 aa11.25□□□□□ -0.61
SRRT-217ENST00000618411 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 LY6HO94772 140 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 F6UB75 175 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 ACYP1P07311 99 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 MUC3AQ02505 3323 aa11.24□□□□□ -0.61
SRRT-217ENST00000618411 KLLNB2CW77 178 aa11.23□□□□□ -0.61
SRRT-217ENST00000618411 TIMM21Q9BVV7 248 aa11.23□□□□□ -0.61
SRRT-217ENST00000618411 M0QY20 66 aa11.23□□□□□ -0.61
SRRT-217ENST00000618411 CLEC2BQ92478 149 aa11.23□□□□□ -0.61
SRRT-217ENST00000618411 ZNF580Q9UK33 172 aa11.23□□□□□ -0.61
SRRT-217ENST00000618411 IGLV4-3A0A075B6K6 122 aa11.22□□□□□ -0.61
SRRT-217ENST00000618411 FAM223BA6NKX1 122 aa11.22□□□□□ -0.61
SRRT-217ENST00000618411 MIAQ16674 131 aa11.22□□□□□ -0.61
SRRT-217ENST00000618411 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
SRRT-217ENST00000618411 FAM223AQ8IWN6 122 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms