RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 MTORP42345 2549 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 SRSF2Q01130 221 aaKnown RBP10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 CFHR3Q02985 330 aa10.01□□□□□ -0.81
PPP4R3B-206ENST00000616407 PRSS29PA6NIE9 313 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 CRXO43186 299 aaPredicted RBP10□□□□□ -0.81
PPP4R3B-206ENST00000616407 TMEM141Q96I45 108 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 JPT2Q9H910 190 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 CLPSL1A2RUU4 121 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 JMJD1CQ15652 2540 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 DEFB130BP0DP73 79 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 DEFB130AP0DP74 79 aa10□□□□□ -0.81
PPP4R3B-206ENST00000616407 A0A0J9YX75 114 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 AZU1P20160 251 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 Q6YL49 198 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 WFDC11Q8NEX6 87 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
PPP4R3B-206ENST00000616407 HIST2H2BCQ6DN03 193 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE1Q13065 139 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE4Q13068 117 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE5Q13069 117 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 FRYLO94915 3013 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 M0R2P5 195 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 SNCGO76070 127 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 SPAG8Q99932 426 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 TSSC4Q9Y5U2 329 aaPredicted RBP9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 ZFAND2AQ8N6M9 145 aa9.98□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE12BA1L429 117 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE7O76087 117 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 NPC2P61916 151 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 C11orf21Q9P2W6 132 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 K7EMI3 77 aa9.97□□□□□ -0.81
PPP4R3B-206ENST00000616407 GATD1Q8NB37 220 aa9.96□□□□□ -0.81
PPP4R3B-206ENST00000616407 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.81
PPP4R3B-206ENST00000616407 COPS9Q8WXC6 57 aa9.96□□□□□ -0.81
PPP4R3B-206ENST00000616407 DLX4Q92988 240 aaPredicted RBP9.96□□□□□ -0.81
PPP4R3B-206ENST00000616407 U3KQE9 123 aa9.96□□□□□ -0.81
PPP4R3B-206ENST00000616407 TMEM238C9JI98 176 aa9.96□□□□□ -0.82
PPP4R3B-206ENST00000616407 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.82
PPP4R3B-206ENST00000616407 PSMB8P28062 276 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 FN1P02751 2386 aaKnown RBP9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 MED14OSP0DP75 135 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 K7EQG2 157 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 KRTAP10-9P60411 292 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 LRRC75A-AS1Q8N1F1 130 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 PIFOQ8TCI5 191 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
PPP4R3B-206ENST00000616407 TRBV7-9A0A0J9YWB2 115 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 Q6ZQT7 251 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 SIVA1O15304 175 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 ODF1Q14990 250 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 PRR9Q5T870 116 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 DSPP15924 2871 aaKnown RBP9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 TRBV25-1A0A075B6N4 114 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 OR13C6PQ8NH95 151 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
PPP4R3B-206ENST00000616407 DNAJC9-AS1A6NH13 148 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 C9orf118A6NHY6 69 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 PCP4P48539 62 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 ANKRD17O75179 2603 aaKnown RBP9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 FASNP49327 2511 aaKnown RBP9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 DSCAML1Q8TD84 2053 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 AKAP13Q12802 2813 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 ACANP16112 2415 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 K7ERJ3 54 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 C4orf3Q8WVX3 66 aa9.93□□□□□ -0.82
PPP4R3B-206ENST00000616407 GAS8-AS1O95177 125 aa9.92□□□□□ -0.82
PPP4R3B-206ENST00000616407 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
PPP4R3B-206ENST00000616407 RHOHQ15669 191 aa9.92□□□□□ -0.82
PPP4R3B-206ENST00000616407 RASL10AQ92737 203 aa9.92□□□□□ -0.82
PPP4R3B-206ENST00000616407 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PPP4R3B-206ENST00000616407 URB1-AS1Q96HZ7 61 aa9.91□□□□□ -0.82
PPP4R3B-206ENST00000616407 J3QQQ9 107 aa9.91□□□□□ -0.82
PPP4R3B-206ENST00000616407 CEND1Q8N111 149 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms