RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GOLGA3Q08378 1498 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 NLRP1Q9C000 1473 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 BLMP54132 1417 aaPredicted RBP1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 A0A087WSZ3 146 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TRAV14DV4A0A0A6YYC5 116 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TRAV17A0A0B4J275 112 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 OOSP1A8MZH6 123 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 APOC4-APOC2K7ER74 178 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 SNCGO76070 127 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TNFP01375 233 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 APOC2P02655 101 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TFF1P04155 84 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 SPINK8P0C7L1 97 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 CXCL8P10145 99 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 IFITM1P13164 125 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 S100A7L2Q5SY68 101 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 OR2T2Q6IF00 324 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 Q6ZS92 163 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 SLC25A26Q70HW3 274 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 SVBPQ8N300 66 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 VSTM2AQ8TAG5 236 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 SPACA4Q8TDM5 124 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 C10orf105Q8TEF2 133 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TMEM242Q9NWH2 141 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 TNRC6AQ8NDV7 1962 aaKnown RBP1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 CEP350Q5VT06 3117 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 MARF1Q9Y4F3 1742 aaKnown RBP1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 COL4A5P29400 1685 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 LRP6O75581 1613 aa1.26□□□□□ -2.21
SCAMP1-205ENST00000614488 MAP3K1Q13233 1512 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 RTEL1-TNFRSF6BF6WH68 1400 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ZNF609O15014 1411 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 KTN1Q86UP2 1357 aaKnown RBP1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PHIPQ8WWQ0 1821 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 A0A1W2PRS3 328 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 MPC2O95563 127 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ANGP03950 147 aaKnown RBP1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PIRTP0C851 137 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 BRS3P32247 399 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ELOBQ15370 118 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 Q1T7F1 81 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 C2orf82Q6UX34 121 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ZNF833PQ6ZTB9 187 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 FP248Q71RG6 208 aaPredicted RBP1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PLPP5Q8NEB5 264 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 SPTSSAQ969W0 71 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 SNHG12Q9BXW3 62 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 RPRMQ9NS64 109 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 RBBP6Q7Z6E9 1792 aaKnown RBP1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 RGPD1P0DJD0 1748 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 CTTNBP2Q8WZ74 1663 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 ABCA6Q8N139 1617 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 TIAM1Q13009 1591 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 SAMD9Q5K651 1589 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 NRKQ7Z2Y5 1582 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 SLIT1O75093 1534 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PRDM15P57071 1507 aaPredicted RBP1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 NEXMIFQ5QGS0 1516 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PTPRDP23468 1912 aa1.25□□□□□ -2.21
SCAMP1-205ENST00000614488 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 NKTRP30414 1462 aaKnown RBP1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 DOCK1Q14185 1865 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 MED13Q9UHV7 2174 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 FREM3P0C091 2139 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 MYO5CQ9NQX4 1742 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 TET3O43151 1660 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 RREB1Q92766 1687 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 CHD3Q12873 2000 aaKnown RBP1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 TRBV6-8A0A0A6YYG3 113 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 NDUFB6O95139 128 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 IL7P13232 177 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 PDE6HQ13956 83 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 C1orf137Q5JT78 98 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 COL5A1-AS1Q5SY13 56 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 Q6AWC8 147 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 TSKUQ8WUA8 353 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 LINC00526Q96FQ7 95 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 DSCR8Q96T75 97 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 NDUFA12Q9UI09 145 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 ABCC1P33527 1531 aa1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 MUC22E2RYF6 1773 aaPredicted RBP1.24□□□□□ -2.21
SCAMP1-205ENST00000614488 UBR1Q8IWV7 1749 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 ANKRD26Q9UPS8 1709 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 CLTCQ00610 1675 aaKnown RBP1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 MYH8P13535 1937 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 USP32Q8NFA0 1604 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 BAZ2BQ9UIF8 2168 aaKnown RBP1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 PVALEFA0A1B0GWK0 134 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 IGKCP01834 107 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 NPC2P61916 151 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 CNBPP62633 177 aaKnown RBP1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 RBM3P98179 157 aaKnown RBP1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 INSL4Q14641 139 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 IQCJQ1A5X6 159 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 KRTAP26-1Q6PEX3 210 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 TTC9CQ8N5M4 171 aa1.23□□□□□ -2.21
SCAMP1-205ENST00000614488 SIP14410 1827 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms