RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 PACRGQ96M98 296 aaPredicted RBP6.51□□□□□ -1.37
CCDC47-207ENST00000612558 WFDC10AQ9H1F0 79 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 LAMTOR2Q9Y2Q5 125 aa6.51□□□□□ -1.37
CCDC47-207ENST00000612558 HTN1P15515 57 aa6.5□□□□□ -1.37
CCDC47-207ENST00000612558 MORN3Q6PF18 240 aaPredicted RBP6.5□□□□□ -1.37
CCDC47-207ENST00000612558 C12orf54Q6X4T0 127 aa6.5□□□□□ -1.37
CCDC47-207ENST00000612558 TMEM158Q8WZ71 300 aa6.5□□□□□ -1.37
CCDC47-207ENST00000612558 CHCHD1Q96BP2 118 aaKnown RBP6.5□□□□□ -1.37
CCDC47-207ENST00000612558 AP1S3Q96PC3 154 aa6.5□□□□□ -1.37
CCDC47-207ENST00000612558 SAMD10Q9BYL1 202 aa6.5□□□□□ -1.37
CCDC47-207ENST00000612558 LINC00614P0C842 121 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 RNASEKQ6P5S7 137 aaKnown RBP6.49□□□□□ -1.37
CCDC47-207ENST00000612558 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 C14orf178Q8N769 122 aaPredicted RBP6.49□□□□□ -1.37
CCDC47-207ENST00000612558 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 TMEM208Q9BTX3 173 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 C1QTNF4Q9BXJ3 329 aa6.49□□□□□ -1.37
CCDC47-207ENST00000612558 SMKR1H3BMG3 65 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 HSBP1O75506 76 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 NCR2O95944 276 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 SMIM17P0DL12 118 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 IGLL1P15814 213 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 RPL35AP18077 110 aaKnown RBP6.48□□□□□ -1.37
CCDC47-207ENST00000612558 AMTP48728 403 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 ZNF415Q09FC8 603 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 KIF25-AS1Q9Y6Z4 181 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 STAB1Q9NY15 2570 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 TNFRSF6BO95407 300 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 NPYP01303 97 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 GIG44P09565 113 aaPredicted RBP6.48□□□□□ -1.37
CCDC47-207ENST00000612558 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 PMCHP20382 165 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 ZNF876PQ49A33 203 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 POM121L12Q8N7R1 296 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 PTH2Q96A98 100 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 GOLT1BQ9Y3E0 138 aa6.48□□□□□ -1.37
CCDC47-207ENST00000612558 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
CCDC47-207ENST00000612558 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 M0R2P5 195 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 PRM2P04554 102 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
CCDC47-207ENST00000612558 LINC00315P59091 139 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 FAM19A2Q8N3H0 131 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 C11orf72Q8NBR9 251 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 SPXQ9BT56 116 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 GSN-AS1Q9NRJ2 163 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 AP5S1Q9NUS5 200 aa6.47□□□□□ -1.37
CCDC47-207ENST00000612558 COL6A5A8TX70 2615 aa6.46□□□□□ -1.37
CCDC47-207ENST00000612558 CMYA5Q8N3K9 4069 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 IGHV3OR16-12A0A075B7B8 117 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 PPP1R17O96001 155 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 MGPP08493 103 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 GATA1P15976 413 aaPredicted RBP6.46□□□□□ -1.38
CCDC47-207ENST00000612558 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 NRACQ8N912 160 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 CSNK1G2-AS1Q8NCQ2 148 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 C12orf57Q99622 126 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 CSTL1Q9H114 145 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 JPT2Q9H910 190 aa6.46□□□□□ -1.38
CCDC47-207ENST00000612558 A0A087WWL8 130 aa6.45□□□□□ -1.38
CCDC47-207ENST00000612558 CRYGDP07320 174 aa6.45□□□□□ -1.38
CCDC47-207ENST00000612558 AZU1P20160 251 aa6.45□□□□□ -1.38
CCDC47-207ENST00000612558 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
CCDC47-207ENST00000612558 Q6ZWC4 215 aa6.45□□□□□ -1.38
CCDC47-207ENST00000612558 TMEM263Q8WUH6 116 aaKnown RBP6.45□□□□□ -1.38
CCDC47-207ENST00000612558 NDUFAF3Q9BU61 184 aa6.45□□□□□ -1.38
CCDC47-207ENST00000612558 NXT2Q9NPJ8 142 aaKnown RBP6.45□□□□□ -1.38
CCDC47-207ENST00000612558 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 A8MWV9 139 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 F5H697 171 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 FAM74A4Q5TZK3 123 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 ZNF705AQ6ZN79 300 aaPredicted RBP6.44□□□□□ -1.38
CCDC47-207ENST00000612558 Q8N8P6 123 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 RNASE8Q8TDE3 154 aaKnown RBP6.44□□□□□ -1.38
CCDC47-207ENST00000612558 RASL10AQ92737 203 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 KIR2DL5BA0A0G2JN68 375 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 KIR2DL5BA0A0G2JPC4 375 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 PMCHL1Q16048 86 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 KIR2DL5AQ8N109 375 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 KIR2DL5BQ8NHK3 375 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 IL17DQ8TAD2 202 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 C16orf74Q96GX8 76 aa6.44□□□□□ -1.38
CCDC47-207ENST00000612558 IGLV2-18A0A075B6J9 118 aa6.43□□□□□ -1.38
CCDC47-207ENST00000612558 LEPROTL1O95214 131 aa6.43□□□□□ -1.38
CCDC47-207ENST00000612558 SUMO2P61956 95 aaKnown RBP6.43□□□□□ -1.38
CCDC47-207ENST00000612558 ZNF56Q15929 161 aa6.43□□□□□ -1.38
CCDC47-207ENST00000612558 RRN3P1Q2M238 152 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms