RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 C7orf71A4D174 169 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 CACNG7P62955 275 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 SMKR1H3BMG3 65 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 FAM19A4Q96LR4 140 aa13.5□□□□□ -0.25
SNAPC3-207ENST00000610884 FGF6P10767 208 aa13.49□□□□□ -0.25
SNAPC3-207ENST00000610884 MRPL51Q4U2R6 128 aaKnown RBP13.49□□□□□ -0.25
SNAPC3-207ENST00000610884 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
SNAPC3-207ENST00000610884 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
SNAPC3-207ENST00000610884 LINC01559Q495D7 138 aa13.49□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 FBLL1A6NHQ2 334 aaKnown RBP13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 IGLC6P0CF74 106 aa13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 COL6A5A8TX70 2615 aa13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 OCIAD2Q56VL3 154 aa13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 MAP6D1Q9H9H5 199 aa13.48□□□□□ -0.25
SNAPC3-207ENST00000610884 CD7P09564 240 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 U3KQK5 164 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 MUC4Q99102 2169 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 M0R381 172 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 HBDP02042 147 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 EVI2AP22794 236 aa13.47□□□□□ -0.25
SNAPC3-207ENST00000610884 NPYP01303 97 aa13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1A1P0DJD3 496 aaKnown RBP13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1CP0DJD4 496 aa13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 RPS20P60866 119 aaKnown RBP13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 RBMY1FQ15415 496 aaKnown RBP13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 LGALS9CQ6DKI2 356 aa13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 VPS25Q9BRG1 176 aa13.46□□□□□ -0.25
SNAPC3-207ENST00000610884 GAGE12BA1L429 117 aa13.46□□□□□ -0.26
SNAPC3-207ENST00000610884 CKS2P33552 79 aa13.46□□□□□ -0.26
SNAPC3-207ENST00000610884 SEC11AP67812 179 aa13.46□□□□□ -0.26
SNAPC3-207ENST00000610884 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.26
SNAPC3-207ENST00000610884 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
SNAPC3-207ENST00000610884 PF4P02776 101 aa13.45□□□□□ -0.26
SNAPC3-207ENST00000610884 KLLNB2CW77 178 aa13.45□□□□□ -0.26
SNAPC3-207ENST00000610884 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
SNAPC3-207ENST00000610884 S100A4P26447 101 aaKnown RBP13.45□□□□□ -0.26
SNAPC3-207ENST00000610884 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 NAA38Q9BRA0 125 aaKnown RBP13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 MDFICQ9P1T7 246 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 H3BMM0 161 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 PPBPP02775 128 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 IFI27L1Q96BM0 104 aa13.44□□□□□ -0.26
SNAPC3-207ENST00000610884 NMUP48645 174 aa13.43□□□□□ -0.26
SNAPC3-207ENST00000610884 JPT2Q9H910 190 aa13.43□□□□□ -0.26
SNAPC3-207ENST00000610884 COTL1Q14019 142 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 SPANXN1Q5VSR9 72 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 FOXI2Q6ZQN5 318 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 DEFB104AQ8WTQ1 72 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 C18orf15Q96N68 181 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 GAGE10A6NGK3 116 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 AP1S3Q96PC3 154 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 LENEPQ9Y5L5 61 aa13.42□□□□□ -0.26
SNAPC3-207ENST00000610884 RNASE3P12724 160 aaKnown RBP13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 PCP2Q8IVA1 136 aa13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 DKK2Q9UBU2 259 aa13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 A6NDN8 102 aa13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 FAM159AQ6UWV7 190 aa13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
SNAPC3-207ENST00000610884 IGHV3OR16-12A0A075B7B8 117 aa13.4□□□□□ -0.26
SNAPC3-207ENST00000610884 H3BUT2 72 aa13.4□□□□□ -0.26
SNAPC3-207ENST00000610884 Q8N1Y9 231 aa13.4□□□□□ -0.26
SNAPC3-207ENST00000610884 RAB37Q96AX2 223 aa13.4□□□□□ -0.26
SNAPC3-207ENST00000610884 HSD52Q0P140 79 aa13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 NDUFA11Q86Y39 141 aa13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 SPAG8Q99932 426 aaPredicted RBP13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 C9orf118A6NHY6 69 aa13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 HLA-DRB4P13762 266 aa13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 HLA-DRB4X5D2U9 266 aa13.39□□□□□ -0.27
SNAPC3-207ENST00000610884 H3BRM9 83 aa13.38□□□□□ -0.27
SNAPC3-207ENST00000610884 C14orf178Q8N769 122 aaPredicted RBP13.38□□□□□ -0.27
SNAPC3-207ENST00000610884 ASIPP42127 132 aa13.38□□□□□ -0.27
SNAPC3-207ENST00000610884 MAP1LC3AQ9H492 121 aa13.38□□□□□ -0.27
SNAPC3-207ENST00000610884 PHLDA3Q9Y5J5 127 aa13.38□□□□□ -0.27
SNAPC3-207ENST00000610884 K7ERU9 68 aa13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 RPL35AP18077 110 aaKnown RBP13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 SAMD13Q5VXD3 122 aa13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 LINC00482Q8N8I6 264 aa13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 RNF185Q96GF1 192 aa13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
SNAPC3-207ENST00000610884 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
SNAPC3-207ENST00000610884 UFSP1Q6NVU6 142 aa13.36□□□□□ -0.27
SNAPC3-207ENST00000610884 GTF2H5Q6ZYL4 71 aa13.36□□□□□ -0.27
SNAPC3-207ENST00000610884 OR11H12B2RN74 326 aa13.36□□□□□ -0.27
SNAPC3-207ENST00000610884 LEPP41159 167 aa13.36□□□□□ -0.27
SNAPC3-207ENST00000610884 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
SNAPC3-207ENST00000610884 A0A087WWL8 130 aa13.35□□□□□ -0.27
SNAPC3-207ENST00000610884 DUSP14O95147 198 aaKnown RBP13.35□□□□□ -0.27
SNAPC3-207ENST00000610884 STHQ8IWL8 128 aa13.35□□□□□ -0.27
SNAPC3-207ENST00000610884 SIVA1O15304 175 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
SNAPC3-207ENST00000610884 CNFNQ9BYD5 112 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms