RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 A0A1W2PRX2 142 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 LINC00315P59091 139 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 Q6ZVH6 145 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 ANK3Q12955 4377 aaKnown RBP10.08□□□□□ -0.8
NEK3-205ENST00000610828 F5H697 171 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 ORMDL2Q53FV1 153 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
NEK3-205ENST00000610828 PPP1R17O96001 155 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 GAGE1Q13065 139 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 HTN1P15515 57 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
NEK3-205ENST00000610828 H3BMM0 161 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 DEFB114Q30KQ6 69 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 RAX2Q96IS3 184 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
NEK3-205ENST00000610828 IGKCP01834 107 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 CD28P10747 220 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 NMUP48645 174 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
NEK3-205ENST00000610828 CD300EQ496F6 205 aaPredicted RBP10.06□□□□□ -0.8
NEK3-205ENST00000610828 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
NEK3-205ENST00000610828 CBY3A6NI87 242 aa10.05□□□□□ -0.8
NEK3-205ENST00000610828 K7EMI3 77 aa10.05□□□□□ -0.8
NEK3-205ENST00000610828 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
NEK3-205ENST00000610828 FGF6P10767 208 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 MAP6D1Q9H9H5 199 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 MTORP42345 2549 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 WNK1Q9H4A3 2382 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 TRGV11A0A075B6L2 103 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1BA6NDE4 496 aaKnown RBP10.04□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1EA6NEQ0 496 aaKnown RBP10.04□□□□□ -0.8
NEK3-205ENST00000610828 DPM2O94777 84 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 RBMY1DP0C7P1 496 aaKnown RBP10.04□□□□□ -0.8
NEK3-205ENST00000610828 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 C2orf91Q6ZV80 131 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
NEK3-205ENST00000610828 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
NEK3-205ENST00000610828 SETD2Q9BYW2 2564 aaPredicted RBP10.03□□□□□ -0.8
NEK3-205ENST00000610828 CCL24O00175 119 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 ZNF56Q15929 161 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 C12orf54Q6X4T0 127 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 DEFB104AQ8WTQ1 72 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
NEK3-205ENST00000610828 HHLA3Q9XRX5 114 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 BVES-AS1Q5T3Y7 98 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 BOD1L2Q8IYS8 172 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
NEK3-205ENST00000610828 A0A087WX48 190 aa10.02□□□□□ -0.8
NEK3-205ENST00000610828 RNASE1P07998 156 aaKnown RBP10.02□□□□□ -0.8
NEK3-205ENST00000610828 PCP2Q8IVA1 136 aa10.02□□□□□ -0.8
NEK3-205ENST00000610828 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.8
NEK3-205ENST00000610828 COX11Q9Y6N1 276 aa10.02□□□□□ -0.8
NEK3-205ENST00000610828 A8MTW9 85 aa10.02□□□□□ -0.81
NEK3-205ENST00000610828 CRYGDP07320 174 aa10.02□□□□□ -0.81
NEK3-205ENST00000610828 FHL3Q13643 280 aa10.02□□□□□ -0.81
NEK3-205ENST00000610828 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
NEK3-205ENST00000610828 ZNF256Q9Y2P7 627 aaPredicted RBP10.02□□□□□ -0.81
NEK3-205ENST00000610828 SDHAF1A6NFY7 115 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
NEK3-205ENST00000610828 ORAOV1Q8WV07 137 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
NEK3-205ENST00000610828 PRM2P04554 102 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
NEK3-205ENST00000610828 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
NEK3-205ENST00000610828 GCN1Q92616 2671 aaKnown RBP10□□□□□ -0.81
NEK3-205ENST00000610828 IGKV2D-26A0A0A0MRZ7 120 aa10□□□□□ -0.81
NEK3-205ENST00000610828 VCYO14598 125 aa10□□□□□ -0.81
NEK3-205ENST00000610828 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
NEK3-205ENST00000610828 ERASQ7Z444 233 aa10□□□□□ -0.81
NEK3-205ENST00000610828 M0QY20 66 aa10□□□□□ -0.81
NEK3-205ENST00000610828 ZNF418Q8TF45 676 aaPredicted RBP10□□□□□ -0.81
NEK3-205ENST00000610828 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 SMR3AQ99954 134 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 C16orf95Q9H693 158 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 F8VRH5 84 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 H7C1H1 209 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 PLNP26678 52 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 TP53TG1Q9Y2A0 90 aa9.99□□□□□ -0.81
NEK3-205ENST00000610828 ODF3L2Q3SX64 289 aa9.98□□□□□ -0.81
NEK3-205ENST00000610828 BAALCQ8WXS3 180 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms