RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RAX2Q96IS3 184 aa20.71■□□□□ 0.91
CSPG5-205ENST00000610462 CCDC168Q8NDH2 2452 aa20.7■□□□□ 0.91
CSPG5-205ENST00000610462 SUMO4Q6EEV6 95 aa20.7■□□□□ 0.9
CSPG5-205ENST00000610462 TRGV11A0A075B6L2 103 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 A0A087WWL8 130 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 C12orf54Q6X4T0 127 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 FGF6P10767 208 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 RPL32P62910 135 aaKnown RBP20.69■□□□□ 0.9
CSPG5-205ENST00000610462 CSTL1Q9H114 145 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 MAP6D1Q9H9H5 199 aa20.69■□□□□ 0.9
CSPG5-205ENST00000610462 FOSL1P15407 271 aa20.68■□□□□ 0.9
CSPG5-205ENST00000610462 TOMM6Q96B49 74 aa20.68■□□□□ 0.9
CSPG5-205ENST00000610462 RNASE1P07998 156 aaKnown RBP20.68■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1A1P0DJD3 496 aaKnown RBP20.68■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1CP0DJD4 496 aa20.68■□□□□ 0.9
CSPG5-205ENST00000610462 CD28P10747 220 aa20.68■□□□□ 0.9
CSPG5-205ENST00000610462 FHL3Q13643 280 aa20.68■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1FQ15415 496 aaKnown RBP20.68■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1BA6NDE4 496 aaKnown RBP20.67■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1EA6NEQ0 496 aaKnown RBP20.67■□□□□ 0.9
CSPG5-205ENST00000610462 IGKCP01834 107 aa20.67■□□□□ 0.9
CSPG5-205ENST00000610462 RBMY1DP0C7P1 496 aaKnown RBP20.67■□□□□ 0.9
CSPG5-205ENST00000610462 C11orf44Q8N8P7 122 aa20.67■□□□□ 0.9
CSPG5-205ENST00000610462 CD300EQ496F6 205 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-205ENST00000610462 C2orf91Q6ZV80 131 aa20.66■□□□□ 0.9
CSPG5-205ENST00000610462 C16orf95Q9H693 158 aa20.66■□□□□ 0.9
CSPG5-205ENST00000610462 F5H697 171 aa20.66■□□□□ 0.9
CSPG5-205ENST00000610462 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-205ENST00000610462 A0A1W2PRX2 142 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 DPM2O94777 84 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 BOD1L2Q8IYS8 172 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 SPAG8Q99932 426 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-205ENST00000610462 HHLA3Q9XRX5 114 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 AKAP9Q99996 3911 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 CBY3A6NI87 242 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 SCGB2A2Q13296 93 aa20.65■□□□□ 0.9
CSPG5-205ENST00000610462 CCL24O00175 119 aa20.64■□□□□ 0.89
CSPG5-205ENST00000610462 PTTG1IPP53801 180 aa20.64■□□□□ 0.89
CSPG5-205ENST00000610462 A0A087WX48 190 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 CCL25O15444 150 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 CRYGDP07320 174 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 POLR2KP53803 58 aaKnown RBP20.63■□□□□ 0.89
CSPG5-205ENST00000610462 FAM74A4Q5TZK3 123 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 LINC01006Q8NI28 216 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 SCGB3A1Q96QR1 104 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 TCTAP57738 103 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 UBE2V1Q13404 147 aa20.63■□□□□ 0.89
CSPG5-205ENST00000610462 ZNF256Q9Y2P7 627 aaPredicted RBP20.63■□□□□ 0.89
CSPG5-205ENST00000610462 TRAV25A0A0B4J276 109 aa20.62■□□□□ 0.89
CSPG5-205ENST00000610462 MRPL35Q9NZE8 188 aaKnown RBP20.62■□□□□ 0.89
CSPG5-205ENST00000610462 TRAV12-1A0A0B4J245 112 aa20.62■□□□□ 0.89
CSPG5-205ENST00000610462 TAX1BP3O14907 124 aa20.62■□□□□ 0.89
CSPG5-205ENST00000610462 C2orf66Q6UXQ4 117 aa20.62■□□□□ 0.89
CSPG5-205ENST00000610462 CITED2Q99967 270 aaPredicted RBP20.62■□□□□ 0.89
CSPG5-205ENST00000610462 ZNF876PQ49A33 203 aa20.61■□□□□ 0.89
CSPG5-205ENST00000610462 TSSC4Q9Y5U2 329 aaPredicted RBP20.61■□□□□ 0.89
CSPG5-205ENST00000610462 TRBV6-5A0A0K0K1A5 114 aa20.6■□□□□ 0.89
CSPG5-205ENST00000610462 NEGR1Q7Z3B1 354 aa20.6■□□□□ 0.89
CSPG5-205ENST00000610462 VCYO14598 125 aa20.6■□□□□ 0.89
CSPG5-205ENST00000610462 NMUP48645 174 aa20.6■□□□□ 0.89
CSPG5-205ENST00000610462 ZNF56Q15929 161 aa20.59■□□□□ 0.89
CSPG5-205ENST00000610462 TMEM160Q9NX00 188 aa20.58■□□□□ 0.89
CSPG5-205ENST00000610462 HELZ2Q9BYK8 2649 aaKnown RBP20.58■□□□□ 0.89
CSPG5-205ENST00000610462 M0QY20 66 aa20.57■□□□□ 0.88
CSPG5-205ENST00000610462 SIVA1O15304 175 aa20.57■□□□□ 0.88
CSPG5-205ENST00000610462 PCP2Q8IVA1 136 aa20.57■□□□□ 0.88
CSPG5-205ENST00000610462 ZNF418Q8TF45 676 aaPredicted RBP20.57■□□□□ 0.88
CSPG5-205ENST00000610462 ANK3Q12955 4377 aaKnown RBP20.57■□□□□ 0.88
CSPG5-205ENST00000610462 SDHAF1A6NFY7 115 aa20.57■□□□□ 0.88
CSPG5-205ENST00000610462 H7C1H1 209 aa20.56■□□□□ 0.88
CSPG5-205ENST00000610462 HTN1P15515 57 aa20.56■□□□□ 0.88
CSPG5-205ENST00000610462 ZC2HC1BQ5TFG8 222 aa20.56■□□□□ 0.88
CSPG5-205ENST00000610462 ERASQ7Z444 233 aa20.56■□□□□ 0.88
CSPG5-205ENST00000610462 NEXN-AS1Q8NBZ9 246 aa20.56■□□□□ 0.88
CSPG5-205ENST00000610462 PLNP26678 52 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 MORN3Q6PF18 240 aaPredicted RBP20.55■□□□□ 0.88
CSPG5-205ENST00000610462 ZFP2Q6ZN57 461 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 CLUHP3Q96NS8 147 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 KIR2DL4Q99706 377 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 ITPR2Q14571 2701 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 TRBV27A0A0K0K1C4 114 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 HILS1P60008 231 aa20.55■□□□□ 0.88
CSPG5-205ENST00000610462 IGKV2D-26A0A0A0MRZ7 120 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 LINC01549A6NIU2 74 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 F8VRH5 84 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 VAMP3Q15836 100 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 ODF3L2Q3SX64 289 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 TRPT1Q86TN4 253 aaKnown RBP20.54■□□□□ 0.88
CSPG5-205ENST00000610462 GTSCR1Q86UQ5 136 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 CYSLTR1Q9Y271 337 aa20.54■□□□□ 0.88
CSPG5-205ENST00000610462 TMEM97Q5BJF2 176 aa20.53■□□□□ 0.88
CSPG5-205ENST00000610462 BAALCQ8WXS3 180 aa20.53■□□□□ 0.88
CSPG5-205ENST00000610462 LINC00467Q9BRT7 94 aa20.53■□□□□ 0.88
CSPG5-205ENST00000610462 CHTOPQ9Y3Y2 248 aaKnown RBP20.53■□□□□ 0.88
CSPG5-205ENST00000610462 ACANP16112 2415 aa20.53■□□□□ 0.88
CSPG5-205ENST00000610462 JMJD8Q96S16 334 aa20.52■□□□□ 0.88
CSPG5-205ENST00000610462 ZNF415Q09FC8 603 aa20.52■□□□□ 0.87
CSPG5-205ENST00000610462 INSP01308 110 aa20.5■□□□□ 0.87
CSPG5-205ENST00000610462 TP53TG1Q9Y2A0 90 aa20.5■□□□□ 0.87
CSPG5-205ENST00000610462 UNC79Q9P2D8 2635 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms