RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
CTSA-214ENST00000606788 ZNF56Q15929 161 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 LURAP1LQ8IV03 231 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
CTSA-214ENST00000606788 ATRQ13535 2644 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
CTSA-214ENST00000606788 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
CTSA-214ENST00000606788 COL5A1-AS1Q5SY13 56 aa11.77□□□□□ -0.53
CTSA-214ENST00000606788 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
CTSA-214ENST00000606788 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
CTSA-214ENST00000606788 IGKV2D-26A0A0A0MRZ7 120 aa11.76□□□□□ -0.53
CTSA-214ENST00000606788 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
CTSA-214ENST00000606788 RBMY1BA6NDE4 496 aaKnown RBP11.76□□□□□ -0.53
CTSA-214ENST00000606788 RBMY1EA6NEQ0 496 aaKnown RBP11.76□□□□□ -0.53
CTSA-214ENST00000606788 RBMY1DP0C7P1 496 aaKnown RBP11.76□□□□□ -0.53
CTSA-214ENST00000606788 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 PROK1P58294 105 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 K7EMI3 77 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 IGHV1OR15-1A0A075B7D0 117 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 LGALS9O00182 355 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 NPSP0C0P6 89 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 P0DMU3 169 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 ODF1Q14990 250 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 NSUN5P1Q3KNT7 163 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
CTSA-214ENST00000606788 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
CTSA-214ENST00000606788 LGALS9BQ3B8N2 356 aa11.74□□□□□ -0.53
CTSA-214ENST00000606788 LGALS9CQ6DKI2 356 aa11.74□□□□□ -0.53
CTSA-214ENST00000606788 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
CTSA-214ENST00000606788 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
CTSA-214ENST00000606788 TEP1Q99973 2627 aaKnown RBP11.74□□□□□ -0.53
CTSA-214ENST00000606788 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 WFDC10AQ9H1F0 79 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 TENM1Q9UKZ4 2725 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 MRAP2Q96G30 205 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 Q9UF83 564 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
CTSA-214ENST00000606788 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
CTSA-214ENST00000606788 LINC00315P59091 139 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 COX8AP10176 69 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 Q8N2B8 174 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
CTSA-214ENST00000606788 CCL24O00175 119 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.53
CTSA-214ENST00000606788 C2orf66Q6UXQ4 117 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 C2orf91Q6ZV80 131 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 RNF152Q8N8N0 203 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 LINC01006Q8NI28 216 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 H3BMM0 161 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 DEFB114Q30KQ6 69 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 KIF25-AS1Q9Y6Z4 181 aa11.71□□□□□ -0.53
CTSA-214ENST00000606788 K7EP13 123 aa11.7□□□□□ -0.54
CTSA-214ENST00000606788 IGKCP01834 107 aa11.7□□□□□ -0.54
CTSA-214ENST00000606788 LINC01587Q99440 93 aa11.7□□□□□ -0.54
CTSA-214ENST00000606788 OPRPNQ99935 248 aaPredicted RBP11.7□□□□□ -0.54
CTSA-214ENST00000606788 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
CTSA-214ENST00000606788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.7□□□□□ -0.54
CTSA-214ENST00000606788 NSD1Q96L73 2696 aaPredicted RBP11.69□□□□□ -0.54
CTSA-214ENST00000606788 BVES-AS1Q5T3Y7 98 aa11.69□□□□□ -0.54
CTSA-214ENST00000606788 SAP30O75446 220 aa11.68□□□□□ -0.54
CTSA-214ENST00000606788 FGF6P10767 208 aa11.68□□□□□ -0.54
CTSA-214ENST00000606788 HHLA3Q9XRX5 114 aa11.68□□□□□ -0.54
CTSA-214ENST00000606788 TP53TG1Q9Y2A0 90 aa11.68□□□□□ -0.54
CTSA-214ENST00000606788 SAMD13Q5VXD3 122 aa11.68□□□□□ -0.54
CTSA-214ENST00000606788 MRPL16Q9NX20 251 aaKnown RBP11.68□□□□□ -0.54
CTSA-214ENST00000606788 DPM2O94777 84 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 CRYGDP07320 174 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 HLA-DRB4P13762 266 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 HLA-DRB4X5D2U9 266 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 ATP5LO75964 103 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
CTSA-214ENST00000606788 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
CTSA-214ENST00000606788 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
CTSA-214ENST00000606788 AZU1P20160 251 aa11.66□□□□□ -0.54
CTSA-214ENST00000606788 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
CTSA-214ENST00000606788 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
CTSA-214ENST00000606788 DLEU1O43261 78 aa11.65□□□□□ -0.54
CTSA-214ENST00000606788 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
CTSA-214ENST00000606788 RPL35AP18077 110 aaKnown RBP11.65□□□□□ -0.54
CTSA-214ENST00000606788 RNASE13Q5GAN3 156 aaKnown RBP11.65□□□□□ -0.54
CTSA-214ENST00000606788 IGHV3-38A0A0C4DH36 116 aa11.64□□□□□ -0.55
CTSA-214ENST00000606788 JMJD8Q96S16 334 aa11.64□□□□□ -0.55
CTSA-214ENST00000606788 C20orf78Q9BR46 151 aa11.64□□□□□ -0.55
CTSA-214ENST00000606788 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
CTSA-214ENST00000606788 F8P00451 2351 aa11.64□□□□□ -0.55
CTSA-214ENST00000606788 LINC01546A6NGU7 62 aa11.64□□□□□ -0.55
CTSA-214ENST00000606788 IGHV3-53P01767 116 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms