RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 GPHB5Q86YW7 130 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 Q8N8P6 123 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 WFDC5Q8TCV5 224 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 UBE2WQ96B02 151 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 FAM103A1Q9BTL3 118 aaKnown RBP2.86□□□□□ -1.95
LINC00397-202ENST00000606785 NMES1Q9C002 83 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 CXCL16Q9H2A7 254 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 LY96Q9Y6Y9 160 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 GPR179Q6PRD1 2367 aa2.86□□□□□ -1.95
LINC00397-202ENST00000606785 NYNRINQ9P2P1 1898 aaKnown RBP2.86□□□□□ -1.95
LINC00397-202ENST00000606785 EML6Q6ZMW3 1958 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 ATAD5Q96QE3 1844 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 IGHV1-24A0A0C4DH33 117 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1-9A0A0C4DH69 117 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1-12A0A0C4DH73 117 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 A6NED7 52 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 FXYD1O00168 92 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 IGKV1D-12P01611 117 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 PRM2P04554 102 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 CXCL8P10145 99 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 INSL4Q14641 139 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 NOXRED1Q6NXP6 359 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 C6orf201Q7Z4U5 140 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 MED12LQ86YW9 2145 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 SPTSSAQ969W0 71 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 ZNF714Q96N38 554 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 NPCDR1Q9BY65 106 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 ABRACLQ9P1F3 81 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 HILPDAQ9Y5L2 63 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 ZFC3H1O60293 1989 aaKnown RBP2.85□□□□□ -1.95
LINC00397-202ENST00000606785 WDR90Q96KV7 1748 aa2.85□□□□□ -1.95
LINC00397-202ENST00000606785 PTPRMP28827 1452 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 SLX4Q8IY92 1834 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 ADGRB2O60241 1585 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 C9JCJ5 164 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 HCRTO43612 131 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 IGHV3-53P01767 116 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 PRH1P02810 166 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 CCKP06307 115 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 CKS2P33552 79 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
LINC00397-202ENST00000606785 FUSP35637 526 aaKnown RBP eCLIP2.84□□□□□ -1.95
LINC00397-202ENST00000606785 DSCR4P56555 118 aaPredicted RBP2.84□□□□□ -1.95
LINC00397-202ENST00000606785 BLCAPP62952 87 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 SSBP1Q04837 148 aaKnown RBP2.84□□□□□ -1.95
LINC00397-202ENST00000606785 CIRBPQ14011 172 aaKnown RBP2.84□□□□□ -1.95
LINC00397-202ENST00000606785 IGFL1Q6UW32 110 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 SCXQ7RTU7 201 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 LYZL2Q7Z4W2 148 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 LINC00643Q86TS7 51 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 TAS2R4Q9NYW5 299 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 IL36BQ9NZH7 164 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 ATG2BQ96BY7 2078 aa2.84□□□□□ -1.95
LINC00397-202ENST00000606785 MAST2Q6P0Q8 1798 aa2.84□□□□□ -1.96
LINC00397-202ENST00000606785 KDM6BO15054 1643 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 SHPRHQ149N8 1683 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 FAM208AQ9UK61 1670 aaKnown RBP2.83□□□□□ -1.96
LINC00397-202ENST00000606785 LOC285556D6RIA3 1793 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 LAMB2P55268 1798 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 A0A1W2PQD3 144 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 IBA57-AS1B1ANH7 110 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 NDUFC1O43677 76 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 CPSF4O95639 269 aaKnown RBP2.83□□□□□ -1.96
LINC00397-202ENST00000606785 EFNA4P52798 201 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 SMIM11AP58511 58 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 RPL30P62888 115 aaKnown RBP2.83□□□□□ -1.96
LINC00397-202ENST00000606785 ZNF56Q15929 161 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 ATP11AUNQ6ZP68 121 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 C1orf64Q8NEQ6 169 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 CLDND2Q8NHS1 167 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 U3KQK5 164 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 MED1Q15648 1581 aaPredicted RBP2.83□□□□□ -1.96
LINC00397-202ENST00000606785 SAMD9LQ8IVG5 1584 aa2.83□□□□□ -1.96
LINC00397-202ENST00000606785 POLEQ07864 2286 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 STRCP1A6NGW2 1772 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 PLXNA1Q9UIW2 1896 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 A0A1B0GW54 56 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 SH2D1AO60880 128 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 RNASE2P10153 161 aaKnown RBP2.82□□□□□ -1.96
LINC00397-202ENST00000606785 CCL4P13236 92 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 SLC25A16P16260 332 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 GCHFRP30047 84 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 DEFB121Q5J5C9 76 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 NCBP2-AS2Q69YL0 99 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 ZCCHC23Q6ZST2 131 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 CMC2Q9NRP2 79 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 SLIT2O94813 1529 aa2.82□□□□□ -1.96
LINC00397-202ENST00000606785 PTPRBP23467 1997 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 PIGBOS1A0A0B4J2F0 54 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 A0A1W2PNU3 283 aaPredicted RBP2.81□□□□□ -1.96
LINC00397-202ENST00000606785 CRYM-AS1A6NIL9 109 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 E7EQL1 145 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 C19orf84I3L1E1 186 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 BCE1O60756 84 aa2.81□□□□□ -1.96
LINC00397-202ENST00000606785 SNRPGP62308 76 aaKnown RBP2.81□□□□□ -1.96
LINC00397-202ENST00000606785 RBM3P98179 157 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms