RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 IGLV2-8P01709 118 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 OR10AG1Q8NH19 301 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
TUBE1-204ENST00000603621 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
TUBE1-204ENST00000603621 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
TUBE1-204ENST00000603621 RHODO00212 210 aa9.81□□□□□ -0.84
TUBE1-204ENST00000603621 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
TUBE1-204ENST00000603621 EVI2AP22794 236 aa9.81□□□□□ -0.84
TUBE1-204ENST00000603621 Q9UF83 564 aa9.81□□□□□ -0.84
TUBE1-204ENST00000603621 TRAV8-6A0A0B4J262 113 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 CRYGDP07320 174 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 CXCL1P09341 107 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 GZMBP10144 247 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 TAGLN2P37802 199 aaKnown RBP9.8□□□□□ -0.84
TUBE1-204ENST00000603621 SPANXN1Q5VSR9 72 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 OR2D3Q8NGH3 330 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 TPPP3Q9BW30 176 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
TUBE1-204ENST00000603621 TRBV20OR9-2A0A075B6H5 130 aa9.79□□□□□ -0.84
TUBE1-204ENST00000603621 TIRAPP58753 221 aa9.79□□□□□ -0.84
TUBE1-204ENST00000603621 IGHV3-38A0A0C4DH36 116 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 SNAI2O43623 268 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 P01737 135 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 OR5AL1P0C617 328 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 CEBPGP53567 150 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 ZNF56Q15929 161 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 LELP1Q5T871 98 aa9.78□□□□□ -0.84
TUBE1-204ENST00000603621 IGHV3-30P01768 117 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 IGHV3-33P01772 117 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 IGHV3-30-3P0DP02 117 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 IGHV3-30-5P0DP03 117 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
TUBE1-204ENST00000603621 RPS20P60866 119 aaKnown RBP9.77□□□□□ -0.85
TUBE1-204ENST00000603621 SMIM12Q96EX1 92 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
TUBE1-204ENST00000603621 BIN3Q9NQY0 253 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 KIAA1109Q2LD37 5005 aa9.77□□□□□ -0.85
TUBE1-204ENST00000603621 F5H697 171 aa9.76□□□□□ -0.85
TUBE1-204ENST00000603621 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
TUBE1-204ENST00000603621 FER1L6-AS1Q8NA97 138 aa9.76□□□□□ -0.85
TUBE1-204ENST00000603621 XKRY2A2RUG3 117 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 SMIM17P0DL12 118 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-204ENST00000603621 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 C10orf126Q8N4M7 172 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 LYPD6BQ8NI32 183 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 OCC1Q8TAD7 63 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
TUBE1-204ENST00000603621 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
TUBE1-204ENST00000603621 C16orf90A8MZG2 172 aa9.74□□□□□ -0.85
TUBE1-204ENST00000603621 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
TUBE1-204ENST00000603621 RAB4BP61018 213 aa9.74□□□□□ -0.85
TUBE1-204ENST00000603621 RPL36AP83881 106 aaKnown RBP9.74□□□□□ -0.85
TUBE1-204ENST00000603621 LINC01556Q5JQF7 62 aa9.74□□□□□ -0.85
TUBE1-204ENST00000603621 RPL36ALQ969Q0 106 aaKnown RBP9.74□□□□□ -0.85
TUBE1-204ENST00000603621 RNASE7Q9H1E1 156 aaKnown RBP9.74□□□□□ -0.85
TUBE1-204ENST00000603621 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 TMEM250H0YL14 139 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 K7EN84 100 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 K7EP13 123 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 Q8N3U1 123 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 AP1S3Q96PC3 154 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 Q9HAA7 133 aa9.73□□□□□ -0.85
TUBE1-204ENST00000603621 HERC2O95714 4834 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 TRBV7-3A0A075B6L6 115 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 MGPP08493 103 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 CACNG7P62955 275 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 LYZL1Q6UWQ5 148 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 NEXN-AS1Q8NBZ9 246 aa9.72□□□□□ -0.85
TUBE1-204ENST00000603621 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
TUBE1-204ENST00000603621 A0A087WWC5 75 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 KRTAP10-2P60368 255 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 ERVFC1-1P60608 527 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 UBE2D3P61077 147 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 UBE2D2P62837 147 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 FAM210AQ96ND0 272 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 KIF25-AS1Q9Y6Z4 181 aa9.71□□□□□ -0.86
TUBE1-204ENST00000603621 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
TUBE1-204ENST00000603621 F2Z2F3 143 aa9.7□□□□□ -0.86
TUBE1-204ENST00000603621 EREGO14944 169 aa9.7□□□□□ -0.86
TUBE1-204ENST00000603621 PSCAO43653 123 aa9.7□□□□□ -0.86
TUBE1-204ENST00000603621 GATCO43716 136 aaKnown RBP9.69□□□□□ -0.86
TUBE1-204ENST00000603621 NTF3P20783 257 aa9.69□□□□□ -0.86
TUBE1-204ENST00000603621 FUSP35637 526 aaKnown RBP eCLIP9.69□□□□□ -0.86
TUBE1-204ENST00000603621 OR10G8Q8NGN5 311 aa9.69□□□□□ -0.86
TUBE1-204ENST00000603621 SMIM7Q9BQ49 75 aa9.69□□□□□ -0.86
TUBE1-204ENST00000603621 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
TUBE1-204ENST00000603621 DNAH5Q8TE73 4624 aa9.69□□□□□ -0.86
TUBE1-204ENST00000603621 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms