RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 SLC25A29Q8N8R3 303 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 TPPP3Q9BW30 176 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 SAMD10Q9BYL1 202 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 GFRA4Q9GZZ7 299 aa9.64□□□□□ -0.87
RNF40-212ENST00000602784 DNAH1Q9P2D7 4330 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 MUC21A0A0G2JKD1 596 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 MUC21A0A140T8X8 626 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 GYPEP15421 78 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 CCL18P55774 89 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 RHOHQ15669 191 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 ADIRFQ15847 76 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 SH2D6Q7Z4S9 175 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 TSKUQ8WUA8 353 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
RNF40-212ENST00000602784 A0A087WWL8 130 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 LINC00862A6NCI5 91 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 K7EQD1 137 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 FAM74A4Q5TZK3 123 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 Q6ZSN1 163 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 AP1S3Q96PC3 154 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 V9GYV3 84 aa9.62□□□□□ -0.87
RNF40-212ENST00000602784 NTF3P20783 257 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 RAB4BP61018 213 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
RNF40-212ENST00000602784 ESRGQ1W209 222 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 UBE2DNLQ8IWF7 75 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 OR10G8Q8NGN5 311 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 KIF25-AS1Q9Y6Z4 181 aa9.61□□□□□ -0.87
RNF40-212ENST00000602784 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 SMIM17P0DL12 118 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 SRIP30626 198 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 SSTP61278 116 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
RNF40-212ENST00000602784 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
RNF40-212ENST00000602784 TRBV10-1A0A0K0K1A3 114 aa9.59□□□□□ -0.87
RNF40-212ENST00000602784 LOC100131303A0A0U1RQF7 123 aa9.59□□□□□ -0.87
RNF40-212ENST00000602784 TMEM218A2RU14 115 aa9.59□□□□□ -0.87
RNF40-212ENST00000602784 LINC00315P59091 139 aa9.59□□□□□ -0.87
RNF40-212ENST00000602784 COMMD7Q86VX2 200 aa9.59□□□□□ -0.87
RNF40-212ENST00000602784 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.88
RNF40-212ENST00000602784 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 TIRAPP58753 221 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 TWIST1Q15672 202 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 LYPD5Q6UWN5 251 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 PGLYRP4Q96LB8 373 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 UPK3BQ9BT76 320 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
RNF40-212ENST00000602784 SACSQ9NZJ4 4579 aa9.58□□□□□ -0.88
RNF40-212ENST00000602784 A0A1B0GUT8 65 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 SMIM27A0A1W2PRY6 76 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 PPP1R2P9O14990 202 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 LINC00694P0DN24 101 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 EVI2AP22794 236 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 ZNRF2Q8NHG8 242 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 BORCS7Q96B45 105 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 NAT8BQ9UHF3 227 aa9.57□□□□□ -0.88
RNF40-212ENST00000602784 F5H697 171 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 ZNF56Q15929 161 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 DPH3P1Q9H4G8 78 aa9.56□□□□□ -0.88
RNF40-212ENST00000602784 F8W036 122 aa9.55□□□□□ -0.88
RNF40-212ENST00000602784 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
RNF40-212ENST00000602784 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
RNF40-212ENST00000602784 ANAPC16Q96DE5 110 aa9.55□□□□□ -0.88
RNF40-212ENST00000602784 Q9UF83 564 aa9.55□□□□□ -0.88
RNF40-212ENST00000602784 TRBV7-3A0A075B6L6 115 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 GAGE12JA6NER3 117 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 H7C1H1 209 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
RNF40-212ENST00000602784 GAGE1Q13065 139 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 GAGE4Q13068 117 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 GAGE5Q13069 117 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 RIGQ13278 110 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 GAGE13Q4V321 117 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
RNF40-212ENST00000602784 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 Q9H8V8 135 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 RYR2Q92736 4967 aa9.54□□□□□ -0.88
RNF40-212ENST00000602784 M0QY20 66 aa9.53□□□□□ -0.88
RNF40-212ENST00000602784 MGPP08493 103 aa9.53□□□□□ -0.88
RNF40-212ENST00000602784 C10orf91Q5T1B1 145 aa9.53□□□□□ -0.88
RNF40-212ENST00000602784 A0A1B0GW15 77 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 UBE2D3P61077 147 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 UBE2D2P62837 147 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 Q6ZR54 194 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 FRZBQ92765 325 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
RNF40-212ENST00000602784 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
RNF40-212ENST00000602784 A0A087WWC5 75 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms