RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 HLA-DRB4X5D2U9 266 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 H3BMM0 161 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 NUDT3O95989 172 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 FXYD7P58549 80 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 TWIST1Q15672 202 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 UBE2V1Q13404 147 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 CNFNQ9BYD5 112 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 CMYA5Q8N3K9 4069 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 COX8AP10176 69 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 SPINK13Q1W4C9 94 aa12.78□□□□□ -0.36
PPFIA3-207ENST00000602716 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.37
PPFIA3-207ENST00000602716 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
PPFIA3-207ENST00000602716 NPYP01303 97 aa12.77□□□□□ -0.37
PPFIA3-207ENST00000602716 CKS2P33552 79 aa12.77□□□□□ -0.37
PPFIA3-207ENST00000602716 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
PPFIA3-207ENST00000602716 A8MTW9 85 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 ORM1P02763 201 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 COTL1Q14019 142 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 KLLNB2CW77 178 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 HBDP02042 147 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 INSL3P51460 131 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 LGALS9BQ3B8N2 356 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 LINC01559Q495D7 138 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 LGALS9CQ6DKI2 356 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
PPFIA3-207ENST00000602716 DUSP14O95147 198 aaKnown RBP12.75□□□□□ -0.37
PPFIA3-207ENST00000602716 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
PPFIA3-207ENST00000602716 C2orf91Q6ZV80 131 aa12.75□□□□□ -0.37
PPFIA3-207ENST00000602716 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
PPFIA3-207ENST00000602716 TAX1BP3O14907 124 aa12.74□□□□□ -0.37
PPFIA3-207ENST00000602716 OXLD1Q5BKU9 147 aa12.74□□□□□ -0.37
PPFIA3-207ENST00000602716 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
PPFIA3-207ENST00000602716 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
PPFIA3-207ENST00000602716 IGKV3D-20A0A0C4DH25 116 aa12.73□□□□□ -0.37
PPFIA3-207ENST00000602716 RBMY1A1P0DJD3 496 aaKnown RBP12.73□□□□□ -0.37
PPFIA3-207ENST00000602716 RBMY1CP0DJD4 496 aa12.73□□□□□ -0.37
PPFIA3-207ENST00000602716 RBMY1FQ15415 496 aaKnown RBP12.73□□□□□ -0.37
PPFIA3-207ENST00000602716 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 LINC01546A6NGU7 62 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 PPBPP02775 128 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 FGF6P10767 208 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 TRAV12-3A0A0B4J271 114 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 WIPF1O43516 503 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 LEPP41159 167 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 CACNG7P62955 275 aa12.72□□□□□ -0.37
PPFIA3-207ENST00000602716 CDKN1BP46527 198 aa12.71□□□□□ -0.37
PPFIA3-207ENST00000602716 IFI27L1Q96BM0 104 aa12.71□□□□□ -0.37
PPFIA3-207ENST00000602716 MAP1LC3AQ9H492 121 aa12.71□□□□□ -0.37
PPFIA3-207ENST00000602716 C7orf71A4D174 169 aa12.71□□□□□ -0.38
PPFIA3-207ENST00000602716 STHQ8IWL8 128 aa12.71□□□□□ -0.38
PPFIA3-207ENST00000602716 GAS8-AS1O95177 125 aa12.7□□□□□ -0.38
PPFIA3-207ENST00000602716 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
PPFIA3-207ENST00000602716 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
PPFIA3-207ENST00000602716 TRAV21A0A0B4J279 112 aa12.69□□□□□ -0.38
PPFIA3-207ENST00000602716 SNAI2O43623 268 aa12.69□□□□□ -0.38
PPFIA3-207ENST00000602716 RPL35AP18077 110 aaKnown RBP12.69□□□□□ -0.38
PPFIA3-207ENST00000602716 VAMP3Q15836 100 aa12.69□□□□□ -0.38
PPFIA3-207ENST00000602716 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
PPFIA3-207ENST00000602716 TNFRSF6BO95407 300 aa12.68□□□□□ -0.38
PPFIA3-207ENST00000602716 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
PPFIA3-207ENST00000602716 ERASQ7Z444 233 aa12.68□□□□□ -0.38
PPFIA3-207ENST00000602716 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
PPFIA3-207ENST00000602716 K7EP13 123 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 GTSCR1Q86UQ5 136 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 Q8N1Y9 231 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 SPRY2O43597 315 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 GIG44P09565 113 aaPredicted RBP12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 TMEM97Q5BJF2 176 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 XCL2Q9UBD3 114 aa12.67□□□□□ -0.38
PPFIA3-207ENST00000602716 CBY3A6NI87 242 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 PRM2P04554 102 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 FCER1GP30273 86 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 OR4C5Q8NGB2 326 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 G3V4G9 280 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 EVI2AP22794 236 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 SEC11AP67812 179 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
PPFIA3-207ENST00000602716 GNRH2O43555 120 aa12.65□□□□□ -0.38
PPFIA3-207ENST00000602716 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
PPFIA3-207ENST00000602716 RNASE8Q8TDE3 154 aaKnown RBP12.64□□□□□ -0.39
PPFIA3-207ENST00000602716 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
PPFIA3-207ENST00000602716 H3BVH4 76 aa12.64□□□□□ -0.39
PPFIA3-207ENST00000602716 RBX1P62877 108 aa12.64□□□□□ -0.39
PPFIA3-207ENST00000602716 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
PPFIA3-207ENST00000602716 SIVA1O15304 175 aa12.63□□□□□ -0.39
PPFIA3-207ENST00000602716 Q8N8P6 123 aa12.63□□□□□ -0.39
PPFIA3-207ENST00000602716 IGHV4-4A0A075B6R2 117 aa12.62□□□□□ -0.39
PPFIA3-207ENST00000602716 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
PPFIA3-207ENST00000602716 ZMAT4Q9H898 229 aa12.62□□□□□ -0.39
PPFIA3-207ENST00000602716 TCTAP57738 103 aa12.62□□□□□ -0.39
PPFIA3-207ENST00000602716 ODF1Q14990 250 aa12.62□□□□□ -0.39
PPFIA3-207ENST00000602716 C1orf158Q8N1D5 194 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms