RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 HIST1H2BNQ99877 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 HIST1H2BMQ99879 126 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 DNAH3Q8TD57 4116 aa16.2■□□□□ 0.18
IRF3-228ENST00000601291 IGHV4-28A0A0C4DH34 117 aa16.19■□□□□ 0.18
IRF3-228ENST00000601291 Q6ZTI0 123 aa16.19■□□□□ 0.18
IRF3-228ENST00000601291 KIF25-AS1Q9Y6Z4 181 aa16.19■□□□□ 0.18
IRF3-228ENST00000601291 PPBPP02775 128 aa16.18■□□□□ 0.18
IRF3-228ENST00000601291 CKS2P33552 79 aa16.18■□□□□ 0.18
IRF3-228ENST00000601291 ORMDL3Q8N138 153 aa16.18■□□□□ 0.18
IRF3-228ENST00000601291 Q8NAQ8 132 aa16.18■□□□□ 0.18
IRF3-228ENST00000601291 MGAM2Q2M2H8 2515 aa16.18■□□□□ 0.18
IRF3-228ENST00000601291 D6R8Y8 96 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 CRYGDP07320 174 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 MRAP2Q96G30 205 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 ALKBH7Q9BT30 221 aaPredicted RBP16.17■□□□□ 0.18
IRF3-228ENST00000601291 SAMD10Q9BYL1 202 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 RHODO00212 210 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 CFAP126Q5VTH2 177 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 SBSPONQ8IVN8 264 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 RETNQ9HD89 108 aa16.17■□□□□ 0.18
IRF3-228ENST00000601291 F5H697 171 aa16.16■□□□□ 0.18
IRF3-228ENST00000601291 RS1O15537 224 aa16.16■□□□□ 0.18
IRF3-228ENST00000601291 ZNF56Q15929 161 aa16.16■□□□□ 0.18
IRF3-228ENST00000601291 U3KQK5 164 aa16.16■□□□□ 0.18
IRF3-228ENST00000601291 TRGV2A0A075B6R0 118 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 GAGE12BA1L429 117 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 LYRM9A8MSI8 78 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 GAGE7O76087 117 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 GAGE12FP0CL80 117 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 GAGE12GP0CL81 117 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 GAGE12IP0CL82 117 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 LINC00315P59091 139 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 POM121L12Q8N7R1 296 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 OR4C5Q8NGB2 326 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 MRAPQ8TCY5 172 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 PRELID3AQ96N28 172 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 SPATA25Q9BR10 227 aa16.15■□□□□ 0.18
IRF3-228ENST00000601291 NCR2O95944 276 aa16.14■□□□□ 0.17
IRF3-228ENST00000601291 TRAV26-2A0A0B4J265 109 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 TRAV4A0A0B4J268 109 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 SMKR1H3BMG3 65 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 LAMTOR2Q9Y2Q5 125 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 NOTCH1P46531 2555 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 DEFB4AO15263 64 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 S100A6P06703 90 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 OR10J3Q5JRS4 329 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 FAM222AQ5U5X8 452 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 ZFP2Q6ZN57 461 aa16.13■□□□□ 0.17
IRF3-228ENST00000601291 UFSP1Q6NVU6 142 aa16.12■□□□□ 0.17
IRF3-228ENST00000601291 IGHV3-73A0A0B4J1V6 119 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 CIDEAO60543 219 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 SUMO4Q6EEV6 95 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 LINC00612Q8N6U2 182 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 TM2D3Q9BRN9 247 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 DKK2Q9UBU2 259 aa16.11■□□□□ 0.17
IRF3-228ENST00000601291 TEX48A0A1B0GUV7 120 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 PPP1R17O96001 155 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 DEFB130BP0DP73 79 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 DEFB130AP0DP74 79 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 NDUFA6P56556 154 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 Q0VG73 95 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 C18orf32Q8TCD1 76 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 NBEAL1Q6ZS30 2694 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 DNHD1Q96M86 4753 aa16.1■□□□□ 0.17
IRF3-228ENST00000601291 C18orf15Q96N68 181 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 H7C1H1 209 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 TNFRSF6BO95407 300 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 NPYP01303 97 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 SPART-AS1P0CW21 52 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 BAGE3Q86Y29 109 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 ZNF479Q96JC4 524 aa16.09■□□□□ 0.17
IRF3-228ENST00000601291 C11orf68Q9H3H3 251 aaKnown RBP16.09■□□□□ 0.17
IRF3-228ENST00000601291 GAS8-AS1O95177 125 aa16.08■□□□□ 0.16
IRF3-228ENST00000601291 IGHV3-53P01767 116 aa16.08■□□□□ 0.16
IRF3-228ENST00000601291 GATA1P15976 413 aaPredicted RBP16.08■□□□□ 0.16
IRF3-228ENST00000601291 IQCJQ1A5X6 159 aa16.07■□□□□ 0.16
IRF3-228ENST00000601291 NRACQ8N912 160 aa16.07■□□□□ 0.16
IRF3-228ENST00000601291 ZMAT4Q9H898 229 aa16.07■□□□□ 0.16
IRF3-228ENST00000601291 DAD1P61803 113 aa16.06■□□□□ 0.16
IRF3-228ENST00000601291 MAP1LC3AQ9H492 121 aa16.06■□□□□ 0.16
IRF3-228ENST00000601291 EDA2RQ9HAV5 297 aa16.06■□□□□ 0.16
IRF3-228ENST00000601291 M0QY20 66 aa16.05■□□□□ 0.16
IRF3-228ENST00000601291 COA6Q5JTJ3 125 aaKnown RBP16.04■□□□□ 0.16
IRF3-228ENST00000601291 RPL39LQ96EH5 51 aaKnown RBP16.04■□□□□ 0.16
IRF3-228ENST00000601291 B9D2Q9BPU9 175 aa16.04■□□□□ 0.16
IRF3-228ENST00000601291 CELA1Q9UNI1 258 aa16.04■□□□□ 0.16
IRF3-228ENST00000601291 TRGV4A0A0C4DH28 118 aa16.03■□□□□ 0.16
IRF3-228ENST00000601291 C20orf78Q9BR46 151 aa16.03■□□□□ 0.16
IRF3-228ENST00000601291 LOC389332A0A1B0GUA5 103 aa16.02■□□□□ 0.16
IRF3-228ENST00000601291 PRSS3P2Q8NHM4 247 aa16.02■□□□□ 0.16
IRF3-228ENST00000601291 ST20Q9HBF5 79 aa16.02■□□□□ 0.16
IRF3-228ENST00000601291 NIT2Q9NQR4 276 aa16.02■□□□□ 0.16
IRF3-228ENST00000601291 SUMO2P61956 95 aaKnown RBP16.01■□□□□ 0.15
IRF3-228ENST00000601291 SNRPEP62304 92 aaKnown RBP16.01■□□□□ 0.15
IRF3-228ENST00000601291 Q6ZSN1 163 aa16.01■□□□□ 0.15
IRF3-228ENST00000601291 SERF1AO75920 110 aa16■□□□□ 0.15
IRF3-228ENST00000601291 NBEAL2Q6ZNJ1 2754 aa16■□□□□ 0.15
IRF3-228ENST00000601291 A0A0J9YWU9 116 aa16■□□□□ 0.15
IRF3-228ENST00000601291 TRBV6-5A0A0K0K1A5 114 aa16■□□□□ 0.15
IRF3-228ENST00000601291 C5orf52A6NGY3 159 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms