RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 CCL21O00585 134 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 NPFFO15130 113 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 TGFAP01135 160 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 RNF183Q96D59 192 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 MOB4Q9Y3A3 225 aa13.98□□□□□ -0.17
ARHGEF1-221ENST00000600387 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 TRBV6-5A0A0K0K1A5 114 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 LEPROTO15243 131 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 RPL11P62913 178 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 FAM159AQ6UWV7 190 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 TEX29Q8N6K0 151 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 ANAPC13Q9BS18 74 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 A4D1N5 150 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 F5H697 171 aa13.97□□□□□ -0.17
ARHGEF1-221ENST00000600387 C9JAW5 83 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 IGHV1-69P01742 117 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 IGHV3-33P01772 117 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 P0DMU3 169 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 FAM231AP0DMU4 169 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 FAM231CP0DMU5 169 aa13.96□□□□□ -0.17
ARHGEF1-221ENST00000600387 KLLNB2CW77 178 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 LGALS9O00182 355 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 TMEM263Q8WUH6 116 aaKnown RBP13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 TRBV12-3P01733 135 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 RAX2Q96IS3 184 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 JPT2Q9H910 190 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 LINC00527Q9UJ94 153 aa13.95□□□□□ -0.18
ARHGEF1-221ENST00000600387 TMEM223A0PJW6 202 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 TMEM219Q86XT9 240 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 CITED1Q99966 193 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 GVINP1Q7Z2Y8 2422 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 A0A087WWL8 130 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 DEFB104AQ8WTQ1 72 aa13.94□□□□□ -0.18
ARHGEF1-221ENST00000600387 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF1-221ENST00000600387 CDSNQ15517 529 aa13.93□□□□□ -0.18
ARHGEF1-221ENST00000600387 RHOHQ15669 191 aa13.93□□□□□ -0.18
ARHGEF1-221ENST00000600387 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
ARHGEF1-221ENST00000600387 USMG5Q96IX5 58 aa13.93□□□□□ -0.18
ARHGEF1-221ENST00000600387 SRD5A1P18405 259 aa13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 TRPT1Q86TN4 253 aaKnown RBP13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 A0A0J9YX75 114 aa13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 EIF4EBP3O60516 100 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 ATXN8Q156A1 80 aa13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 LINC01600Q96MT4 127 aa13.92□□□□□ -0.18
ARHGEF1-221ENST00000600387 TRAV2A0A0B4J234 112 aa13.91□□□□□ -0.18
ARHGEF1-221ENST00000600387 BRI3O95415 125 aa13.91□□□□□ -0.18
ARHGEF1-221ENST00000600387 RHPN1-AS1Q9BWJ2 59 aa13.91□□□□□ -0.18
ARHGEF1-221ENST00000600387 SPTBN2O15020 2390 aa13.91□□□□□ -0.18
ARHGEF1-221ENST00000600387 MED13LQ71F56 2210 aa13.91□□□□□ -0.18
ARHGEF1-221ENST00000600387 H3BUA1 57 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 K7ENP7 123 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 ADORA2A-AS1P86434 159 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 MUSTN1Q8IVN3 82 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 ZNF256Q9Y2P7 627 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 IGKV3-7A0A075B6H7 116 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 MDFICQ9P1T7 246 aa13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 HRNRQ86YZ3 2850 aaPredicted RBP13.9□□□□□ -0.18
ARHGEF1-221ENST00000600387 RHODO00212 210 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 GAGE5Q13069 117 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 GAGE6Q13070 117 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 ZNF292O60281 2723 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 SNCGO76070 127 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 ID1P41134 155 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 LMO4P61968 165 aa13.89□□□□□ -0.19
ARHGEF1-221ENST00000600387 M0R2P5 195 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 Q1RN00 199 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 LINC01620Q4KN68 170 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 FAM74A4Q5TZK3 123 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 H7C2G1 150 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 M0QY20 66 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 GATA3P23771 443 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 GAGE2BQ13066 116 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 GAGE2EQ4V326 116 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 Q8N1Y9 231 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 GAGE2DQ9UEU5 116 aa13.88□□□□□ -0.19
ARHGEF1-221ENST00000600387 ZNF56Q15929 161 aa13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 NTN5Q8WTR8 489 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 OPRPNQ99935 248 aaPredicted RBP13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 TRAV12-3A0A0B4J271 114 aa13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 TRBV30A0A0K0K1B3 111 aa13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 IGHV3-11P01762 117 aa13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 C20orf203Q8NBC4 194 aa13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 DAZ1Q9NQZ3 744 aaKnown RBP13.87□□□□□ -0.19
ARHGEF1-221ENST00000600387 IGHV3-16A0A0C4DH30 117 aa13.85□□□□□ -0.19
ARHGEF1-221ENST00000600387 TRBV10-2A0A0K0K1G8 114 aa13.85□□□□□ -0.19
ARHGEF1-221ENST00000600387 Q6Q795 121 aa13.85□□□□□ -0.19
ARHGEF1-221ENST00000600387 TLN1Q9Y490 2541 aaKnown RBP13.85□□□□□ -0.19
ARHGEF1-221ENST00000600387 A0A0J9YXY3 114 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 TCF15Q12870 199 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 ODF3Q96PU9 254 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 BPESC1Q9GZL8 116 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 IGHV3-64A0A075B6Q5 118 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 I3L3M4 83 aa13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 NHLRC4P0CG21 123 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF1-221ENST00000600387 NDUFV3P56181 108 aaKnown RBP13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 IGLV4-3A0A075B6K6 122 aa13.83□□□□□ -0.2
ARHGEF1-221ENST00000600387 TRAV8-4A0A0B4J246 113 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms