RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ZFP82Q8N141 532 aa12.94□□□□□ -0.34
FARP1-229ENST00000600190 TRBV20OR9-2A0A075B6H5 130 aa12.93□□□□□ -0.34
FARP1-229ENST00000600190 SFTA3P0C7M3 94 aa12.93□□□□□ -0.34
FARP1-229ENST00000600190 RPL19P84098 196 aaKnown RBP12.93□□□□□ -0.34
FARP1-229ENST00000600190 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
FARP1-229ENST00000600190 ZNF479Q96JC4 524 aa12.93□□□□□ -0.34
FARP1-229ENST00000600190 HERC1Q15751 4861 aa12.93□□□□□ -0.34
FARP1-229ENST00000600190 C19orf71A6NCJ1 209 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 M0R381 172 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 SIVA1O15304 175 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 RS1O15537 224 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 FHL2Q14192 279 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 TMEM241Q24JQ0 296 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 NUDT10Q8NFP7 164 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 NUDT11Q96G61 164 aa12.92□□□□□ -0.34
FARP1-229ENST00000600190 GATCO43716 136 aaKnown RBP12.91□□□□□ -0.34
FARP1-229ENST00000600190 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
FARP1-229ENST00000600190 CLLU1Q5K131 121 aa12.91□□□□□ -0.34
FARP1-229ENST00000600190 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
FARP1-229ENST00000600190 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
FARP1-229ENST00000600190 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
FARP1-229ENST00000600190 F2Z2F3 143 aa12.9□□□□□ -0.34
FARP1-229ENST00000600190 FUSP35637 526 aaKnown RBP eCLIP12.9□□□□□ -0.34
FARP1-229ENST00000600190 CRYBA4P53673 196 aa12.9□□□□□ -0.34
FARP1-229ENST00000600190 MRPL23Q16540 153 aaKnown RBP12.9□□□□□ -0.34
FARP1-229ENST00000600190 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
FARP1-229ENST00000600190 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
FARP1-229ENST00000600190 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
FARP1-229ENST00000600190 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
FARP1-229ENST00000600190 RHODO00212 210 aa12.89□□□□□ -0.35
FARP1-229ENST00000600190 NXPH4O95158 308 aa12.89□□□□□ -0.35
FARP1-229ENST00000600190 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
FARP1-229ENST00000600190 ZFP2Q6ZN57 461 aa12.89□□□□□ -0.35
FARP1-229ENST00000600190 C15orf54Q8N8G6 183 aa12.89□□□□□ -0.35
FARP1-229ENST00000600190 RPP21Q9H633 154 aaKnown RBP12.89□□□□□ -0.35
FARP1-229ENST00000600190 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 EREGO14944 169 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 SNAI2O43623 268 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 SMIM17P0DL12 118 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
FARP1-229ENST00000600190 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
FARP1-229ENST00000600190 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 NAT8Q9UHE5 227 aa12.88□□□□□ -0.35
FARP1-229ENST00000600190 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 A8MWL6 223 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 K7EN84 100 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 SSTP61278 116 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 CACNG7P62955 275 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 FAM74A4Q5TZK3 123 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 SH2D6Q7Z4S9 175 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 SFRP2Q96HF1 295 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
FARP1-229ENST00000600190 TRBV6-4A0A1B0GX49 114 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 SRIP30626 198 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 RHOHQ15669 191 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 LINC01551Q86U37 167 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 BORCS7Q96B45 105 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 FAT1Q14517 4588 aa12.86□□□□□ -0.35
FARP1-229ENST00000600190 GZMBP10144 247 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 GYPEP15421 78 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 GATA1P15976 413 aaPredicted RBP12.85□□□□□ -0.35
FARP1-229ENST00000600190 SRSF3P84103 164 aaKnown RBP12.85□□□□□ -0.35
FARP1-229ENST00000600190 IFITM2Q01629 132 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 ADIRFQ15847 76 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
FARP1-229ENST00000600190 LYPD5Q6UWN5 251 aa12.84□□□□□ -0.35
FARP1-229ENST00000600190 OSTCQ9NRP0 149 aa12.84□□□□□ -0.35
FARP1-229ENST00000600190 MUC21A0A0G2JKD1 596 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 MUC21A0A140T8X8 626 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 WDR73Q6P4I2 378 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 LYZL1Q6UWQ5 148 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 AP1S3Q96PC3 154 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 JPT2Q9H910 190 aa12.83□□□□□ -0.36
FARP1-229ENST00000600190 A0A087WWL8 130 aa12.82□□□□□ -0.36
FARP1-229ENST00000600190 C9JQL5 133 aa12.82□□□□□ -0.36
FARP1-229ENST00000600190 F5H697 171 aa12.82□□□□□ -0.36
FARP1-229ENST00000600190 RPL23P62829 140 aaKnown RBP12.82□□□□□ -0.36
FARP1-229ENST00000600190 CT83Q5H943 113 aa12.82□□□□□ -0.36
FARP1-229ENST00000600190 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
FARP1-229ENST00000600190 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 K7EQD1 137 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 INAFM2P0DMQ5 153 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 XGP55808 180 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 ZNF56Q15929 161 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
FARP1-229ENST00000600190 NTF3P20783 257 aa12.8□□□□□ -0.36
FARP1-229ENST00000600190 TWIST1Q15672 202 aa12.8□□□□□ -0.36
FARP1-229ENST00000600190 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
FARP1-229ENST00000600190 ISOC2Q96AB3 205 aa12.8□□□□□ -0.36
FARP1-229ENST00000600190 SAMD10Q9BYL1 202 aa12.8□□□□□ -0.36
FARP1-229ENST00000600190 A0A087WTM6 91 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms