RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PCNPQ8WW12 178 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 PTH2Q96A98 100 aa9.08□□□□□ -0.96
SHKBP1-208ENST00000595726 hCG_2014768A0A024R1R8 64 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 B4DEV8 164 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 RS1O15537 224 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 RAB5CP51148 216 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 ZNF674Q2M3X9 581 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 FAM162BQ5T6X4 162 aa9.07□□□□□ -0.96
SHKBP1-208ENST00000595726 LOC100131303A0A0U1RQF7 123 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 IBA57-AS1B1ANH7 110 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 KRBOX1C9JBD0 128 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 M0R036 132 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 CIDEAO60543 219 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 SULT1A2P50226 295 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 CCL20P78556 96 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 DNLZQ5SXM8 178 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 NHLRC2Q8NBF2 726 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 IL36BQ9NZH7 164 aa9.06□□□□□ -0.96
SHKBP1-208ENST00000595726 IGHV3-73A0A0B4J1V6 119 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 H3BVH4 76 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 SLC51BQ86UW2 128 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 SLC25A29Q8N8R3 303 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 TXNDC17Q9BRA2 123 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 GNG13Q9P2W3 67 aa9.05□□□□□ -0.96
SHKBP1-208ENST00000595726 IGHV3-38A0A0C4DH36 116 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 TRBV6-4A0A1B0GX49 114 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 RHOHQ15669 191 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 C9orf62Q8N4C0 152 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 DAZAP1Q96EP5 407 aaKnown RBP9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 PARLQ9H300 379 aa9.04□□□□□ -0.96
SHKBP1-208ENST00000595726 TMSB15BA0A087X1C1 80 aa9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 A8MWV9 139 aa9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 ARMS2P0C7Q2 107 aa9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 C11orf52Q96A22 123 aa9.03□□□□□ -0.96
SHKBP1-208ENST00000595726 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 IGHV3-30P01768 117 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 IGHV3-33P01772 117 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 IGHV3-30-5P0DP03 117 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 ZFP2Q6ZN57 461 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 SH2D6Q7Z4S9 175 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 BAGE2Q86Y30 109 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 PRADC1Q9BSG0 188 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SHKBP1-208ENST00000595726 RPL35P42766 123 aaKnown RBP9.01□□□□□ -0.97
SHKBP1-208ENST00000595726 LINC01556Q5JQF7 62 aa9.01□□□□□ -0.97
SHKBP1-208ENST00000595726 UFSP1Q6NVU6 142 aa9.01□□□□□ -0.97
SHKBP1-208ENST00000595726 TIRAPP58753 221 aa9□□□□□ -0.97
SHKBP1-208ENST00000595726 RPL37AP61513 92 aaKnown RBP9□□□□□ -0.97
SHKBP1-208ENST00000595726 RPL19P84098 196 aaKnown RBP9□□□□□ -0.97
SHKBP1-208ENST00000595726 PRR27Q6MZM9 219 aa9□□□□□ -0.97
SHKBP1-208ENST00000595726 SAMD10Q9BYL1 202 aa9□□□□□ -0.97
SHKBP1-208ENST00000595726 PHLDA3Q9Y5J5 127 aa9□□□□□ -0.97
SHKBP1-208ENST00000595726 M0R381 172 aa8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 IFNA1P01562 189 aa8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 CXCL1P09341 107 aa8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 BCL2P10415 239 aa8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 MEF2BQ02080 365 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
SHKBP1-208ENST00000595726 RBFOX3A6NFN3 312 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 RHODO00212 210 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 PDE6DO43924 150 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 CENPWQ5EE01 88 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 ZFP82Q8N141 532 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 Q8N3U1 123 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 SFRP2Q96HF1 295 aa8.98□□□□□ -0.97
SHKBP1-208ENST00000595726 A0A087WWL8 130 aa8.97□□□□□ -0.97
SHKBP1-208ENST00000595726 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
SHKBP1-208ENST00000595726 ALKAL2Q6UX46 152 aa8.97□□□□□ -0.97
SHKBP1-208ENST00000595726 C14orf178Q8N769 122 aaPredicted RBP8.97□□□□□ -0.97
SHKBP1-208ENST00000595726 TM2D2Q9BX73 214 aa8.97□□□□□ -0.97
SHKBP1-208ENST00000595726 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GAGE12JA6NER3 117 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 SNAI2O43623 268 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GAGE1Q13065 139 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GAGE4Q13068 117 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GAGE5Q13069 117 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 ODF1Q14990 250 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 GAGE13Q4V321 117 aa8.96□□□□□ -0.98
SHKBP1-208ENST00000595726 OR10J3Q5JRS4 329 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms