RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 KNCNA6PVL3 124 aa14.54□□□□□ -0.08
CLIP3-206ENST00000593074 DYNLRB2Q8TF09 96 aa14.54□□□□□ -0.08
CLIP3-206ENST00000593074 TOMM6Q96B49 74 aa14.54□□□□□ -0.08
CLIP3-206ENST00000593074 H3BMM0 161 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 ZNF25P17030 456 aaPredicted RBP14.53□□□□□ -0.08
CLIP3-206ENST00000593074 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 BOD1L2Q8IYS8 172 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 SYT8Q8NBV8 401 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 SMR3AQ99954 134 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 HHLA3Q9XRX5 114 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 A0A1W2PRX2 142 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 HILS1P60008 231 aa14.53□□□□□ -0.08
CLIP3-206ENST00000593074 A0A087WWL8 130 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 IGKCP01834 107 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 DEFB114Q30KQ6 69 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 C12orf54Q6X4T0 127 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 TMEM208Q9BTX3 173 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 CSTL1Q9H114 145 aa14.52□□□□□ -0.09
CLIP3-206ENST00000593074 GCN1Q92616 2671 aaKnown RBP14.52□□□□□ -0.09
CLIP3-206ENST00000593074 TRGV11A0A075B6L2 103 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.51□□□□□ -0.09
CLIP3-206ENST00000593074 DPM2O94777 84 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1A1P0DJD3 496 aaKnown RBP14.51□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1CP0DJD4 496 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 FHL3Q13643 280 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1FQ15415 496 aaKnown RBP14.51□□□□□ -0.09
CLIP3-206ENST00000593074 BVES-AS1Q5T3Y7 98 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 DLEU1O43261 78 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 G0S2P27469 103 aa14.51□□□□□ -0.09
CLIP3-206ENST00000593074 FASNP49327 2511 aaKnown RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1BA6NDE4 496 aaKnown RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1EA6NEQ0 496 aaKnown RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 CCL24O00175 119 aa14.5□□□□□ -0.09
CLIP3-206ENST00000593074 RBMY1DP0C7P1 496 aaKnown RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 CITED2Q99967 270 aaPredicted RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 MAP6D1Q9H9H5 199 aa14.5□□□□□ -0.09
CLIP3-206ENST00000593074 TSSC4Q9Y5U2 329 aaPredicted RBP14.5□□□□□ -0.09
CLIP3-206ENST00000593074 A0A087WX48 190 aa14.5□□□□□ -0.09
CLIP3-206ENST00000593074 GAGE1Q13065 139 aa14.5□□□□□ -0.09
CLIP3-206ENST00000593074 SORL1Q92673 2214 aa14.49□□□□□ -0.09
CLIP3-206ENST00000593074 TRAV12-1A0A0B4J245 112 aa14.49□□□□□ -0.09
CLIP3-206ENST00000593074 POLR2KP53803 58 aaKnown RBP14.49□□□□□ -0.09
CLIP3-206ENST00000593074 CD300EQ496F6 205 aaPredicted RBP14.49□□□□□ -0.09
CLIP3-206ENST00000593074 MRPL35Q9NZE8 188 aaKnown RBP14.49□□□□□ -0.09
CLIP3-206ENST00000593074 LY6G6DO95868 133 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 CRYGDP07320 174 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 ZNF124Q15973 351 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 C2orf66Q6UXQ4 117 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 SPAG8Q99932 426 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-206ENST00000593074 TRBV6-5A0A0K0K1A5 114 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 TCTAP57738 103 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 SCGB3A1Q96QR1 104 aa14.48□□□□□ -0.09
CLIP3-206ENST00000593074 ZNF256Q9Y2P7 627 aaPredicted RBP14.48□□□□□ -0.09
CLIP3-206ENST00000593074 CBY3A6NI87 242 aa14.47□□□□□ -0.09
CLIP3-206ENST00000593074 F5H697 171 aa14.47□□□□□ -0.09
CLIP3-206ENST00000593074 SIVA1O15304 175 aa14.47□□□□□ -0.09
CLIP3-206ENST00000593074 NMUP48645 174 aa14.47□□□□□ -0.09
CLIP3-206ENST00000593074 FAM74A4Q5TZK3 123 aa14.47□□□□□ -0.09
CLIP3-206ENST00000593074 PLNP26678 52 aa14.46□□□□□ -0.09
CLIP3-206ENST00000593074 PCP2Q8IVA1 136 aa14.46□□□□□ -0.09
CLIP3-206ENST00000593074 JMJD8Q96S16 334 aa14.46□□□□□ -0.09
CLIP3-206ENST00000593074 NEGR1Q7Z3B1 354 aa14.46□□□□□ -0.09
CLIP3-206ENST00000593074 HECTD1Q9ULT8 2610 aa14.46□□□□□ -0.1
CLIP3-206ENST00000593074 IGKV2D-26A0A0A0MRZ7 120 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 TRAV25A0A0B4J276 109 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 NDUFA7O95182 113 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ZNF876PQ49A33 203 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 COX11Q9Y6N1 276 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 CUBNO60494 3623 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 TRBV27A0A0K0K1C4 114 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 M0QY20 66 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 VCYO14598 125 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ZNF56Q15929 161 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ZC2HC1BQ5TFG8 222 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ERASQ7Z444 233 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 NEXN-AS1Q8NBZ9 246 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ORAOV1Q8WV07 137 aa14.45□□□□□ -0.1
CLIP3-206ENST00000593074 ANK3Q12955 4377 aaKnown RBP14.44□□□□□ -0.1
CLIP3-206ENST00000593074 LINC01549A6NIU2 74 aa14.44□□□□□ -0.1
CLIP3-206ENST00000593074 F8VRH5 84 aa14.44□□□□□ -0.1
CLIP3-206ENST00000593074 H7C1H1 209 aa14.44□□□□□ -0.1
CLIP3-206ENST00000593074 MORN3Q6PF18 240 aaPredicted RBP14.44□□□□□ -0.1
CLIP3-206ENST00000593074 SDHAF1A6NFY7 115 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 CLUHP3Q96NS8 147 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 ZFP2Q6ZN57 461 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 BAALCQ8WXS3 180 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 KIR2DL4Q99706 377 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 CYSLTR1Q9Y271 337 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 NF1P21359 2839 aa14.43□□□□□ -0.1
CLIP3-206ENST00000593074 MTORP42345 2549 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 ODF3L2Q3SX64 289 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 TMEM97Q5BJF2 176 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 Q6ZVH6 145 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 GTSCR1Q86UQ5 136 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 LINC00467Q9BRT7 94 aa14.42□□□□□ -0.1
CLIP3-206ENST00000593074 RIPPLY3P57055 190 aa14.41□□□□□ -0.1
CLIP3-206ENST00000593074 TRPT1Q86TN4 253 aaKnown RBP14.41□□□□□ -0.1
CLIP3-206ENST00000593074 CHTOPQ9Y3Y2 248 aaKnown RBP14.41□□□□□ -0.1
CLIP3-206ENST00000593074 HIVEP2P31629 2446 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 1592 ms