RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MBP02144 154 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 CRISP2P16562 243 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 DAZ2Q13117 558 aaKnown RBP5.16□□□□□ -1.58
VMP1-213ENST00000591877 LINC00242Q5T6M2 205 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 Q6ZTI0 123 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 FAM213BQ8TBF2 198 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 LINC00467Q9BRT7 94 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 PAXXQ9BUH6 204 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 MRPL32Q9BYC8 188 aaKnown RBP5.16□□□□□ -1.58
VMP1-213ENST00000591877 VCX2Q9H322 139 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 FUT9Q9Y231 359 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 MUC4Q99102 2169 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 PKHD1P08F94 4074 aa5.16□□□□□ -1.58
VMP1-213ENST00000591877 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 A0A0J9YY99 117 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 NBDYA0A0U1RRE5 68 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 RNASE4P34096 147 aaKnown RBP5.15□□□□□ -1.59
VMP1-213ENST00000591877 RAB2AP61019 212 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 OR5I1Q13606 314 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 Q8TAT8 98 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 RXFP4Q8TDU9 374 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 ZNF492Q9P255 531 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 TP53TG3Q9ULZ0 132 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 KLF12Q9Y4X4 402 aa5.15□□□□□ -1.59
VMP1-213ENST00000591877 IGLV7-46A0A075B6I9 117 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 TRAV1-1A0A0B4J248 108 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 OR7C2O60412 319 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 SPINK4O60575 86 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 GPX1P07203 203 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 M6PRP20645 277 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 ZNF138P52744 262 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 ESRGQ1W209 222 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 ACOT6Q3I5F7 207 aaPredicted RBP5.14□□□□□ -1.59
VMP1-213ENST00000591877 TMEM78Q5T7P6 136 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 C1orf134Q5TEV5 83 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 SSX7Q7RTT5 188 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 MBD3L1Q8WWY6 194 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 VSIG2Q96IQ7 327 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 C18orf15Q96N68 181 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 OCR1Q9BZK8 76 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 Q9H3A6 140 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 SMDT1Q9H4I9 107 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 DNAH11Q96DT5 4516 aa5.14□□□□□ -1.59
VMP1-213ENST00000591877 DYNC1H1Q14204 4646 aaKnown RBP5.14□□□□□ -1.59
VMP1-213ENST00000591877 IGHV1OR15-1A0A075B7D0 117 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 A0A096LPF7 62 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 TRBV7-9A0A0J9YWB2 115 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 CTXND1A0A1B0GTU2 59 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 TMEM218A2RU14 115 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 H3BNG1 76 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 CCL18P55774 89 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 TCL1AP56279 114 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 RANP62826 216 aaKnown RBP5.13□□□□□ -1.59
VMP1-213ENST00000591877 UBE2L3P68036 154 aaKnown RBP5.13□□□□□ -1.59
VMP1-213ENST00000591877 LYPD1Q8N2G4 141 aa5.13□□□□□ -1.59
VMP1-213ENST00000591877 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 TRGV1A0A0A0MS02 117 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 RBAKDNA6NC62 111 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 MAP1LC3B2A6NCE7 125 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 NDUFS6O75380 124 aaKnown RBP5.12□□□□□ -1.59
VMP1-213ENST00000591877 PEA15Q15121 130 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 ZNF726P1Q15940 193 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 KHDC3LQ587J8 217 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 SOHLH1Q5JUK2 328 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 IBA57Q5T440 356 aaKnown RBP5.12□□□□□ -1.59
VMP1-213ENST00000591877 C6orf223Q8N319 242 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 OR10G4Q8NGN3 311 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 OR10G9Q8NGN4 311 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 SFT2D1Q8WV19 159 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 UPK3BQ9BT76 320 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 ACTR3CQ9C0K3 210 aaPredicted RBP5.12□□□□□ -1.59
VMP1-213ENST00000591877 MAP1LC3BQ9GZQ8 125 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 TREM1Q9NP99 234 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 MRPL16Q9NX20 251 aaKnown RBP5.12□□□□□ -1.59
VMP1-213ENST00000591877 MDFICQ9P1T7 246 aa5.12□□□□□ -1.59
VMP1-213ENST00000591877 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 PGPA6NDG6 321 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 HMGB3O15347 200 aaKnown RBP5.11□□□□□ -1.59
VMP1-213ENST00000591877 IFNA1P01562 189 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
VMP1-213ENST00000591877 CSN1S1P47710 185 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 CDC34P49427 236 aaPredicted RBP5.11□□□□□ -1.59
VMP1-213ENST00000591877 ZNF506Q5JVG8 444 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 C10orf91Q5T1B1 145 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 Q6AWC8 147 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 TVP23CQ96ET8 276 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 SEC11CQ9BY50 192 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 KRTAP4-4Q9BYR3 166 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 RPH3ALQ9UNE2 315 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 CARHSP1Q9Y2V2 147 aaKnown RBP5.11□□□□□ -1.59
VMP1-213ENST00000591877 MRPS16Q9Y3D3 137 aaKnown RBP5.11□□□□□ -1.59
VMP1-213ENST00000591877 LENEPQ9Y5L5 61 aa5.11□□□□□ -1.59
VMP1-213ENST00000591877 TRAV8-1A0A0A6YYK1 113 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 A0A1W2PPV4 95 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 RBFOX3A6NFN3 312 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 IFITM10A6NMD0 228 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 F8W036 122 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 IGHV3-53P01767 116 aa5.1□□□□□ -1.59
VMP1-213ENST00000591877 CFC1BP0CG36 223 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms