RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 VAX2Q9UIW0 290 aa8.21□□□□□ -1.1
TPM4-212ENST00000590180 C16orf90A8MZG2 172 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 K7EP13 123 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 DNAH10OSP0CZ25 163 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 MED14OSP0DP75 135 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 BCL2P10415 239 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 GNG4P50150 75 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 LELP1Q5T871 98 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 UFSP1Q6NVU6 142 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 ALKAL2Q6UX46 152 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 SPATA12Q7Z6I5 190 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 Q9UF83 564 aa8.2□□□□□ -1.1
TPM4-212ENST00000590180 A0A1B0GVG6 124 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 CXCL1P09341 107 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 IGHV3-30-3P0DP02 117 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 BLOC1S1P78537 153 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 SPANXN1Q5VSR9 72 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 OR10AG1Q8NH19 301 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
TPM4-212ENST00000590180 EREGO14944 169 aa8.18□□□□□ -1.1
TPM4-212ENST00000590180 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
TPM4-212ENST00000590180 TAGLN2P37802 199 aaKnown RBP8.18□□□□□ -1.1
TPM4-212ENST00000590180 NKX2-5P52952 324 aaPredicted RBP8.18□□□□□ -1.1
TPM4-212ENST00000590180 Q6ZRN7 208 aaPredicted RBP8.18□□□□□ -1.1
TPM4-212ENST00000590180 OR2D3Q8NGH3 330 aa8.18□□□□□ -1.1
TPM4-212ENST00000590180 TPPP3Q9BW30 176 aa8.18□□□□□ -1.1
TPM4-212ENST00000590180 F5H697 171 aa8.17□□□□□ -1.1
TPM4-212ENST00000590180 GZMBP10144 247 aa8.17□□□□□ -1.1
TPM4-212ENST00000590180 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
TPM4-212ENST00000590180 LINC01556Q5JQF7 62 aa8.17□□□□□ -1.1
TPM4-212ENST00000590180 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
TPM4-212ENST00000590180 BIN3Q9NQY0 253 aa8.17□□□□□ -1.1
TPM4-212ENST00000590180 PKD1P98161 4303 aa8.17□□□□□ -1.1
TPM4-212ENST00000590180 RBFOX3A6NFN3 312 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 SNAI2O43623 268 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 P01737 135 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 OR5AL1P0C617 328 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 SMIM17P0DL12 118 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 RPL36AP83881 106 aaKnown RBP8.16□□□□□ -1.1
TPM4-212ENST00000590180 ZNF56Q15929 161 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
TPM4-212ENST00000590180 SMIM12Q96EX1 92 aa8.16□□□□□ -1.1
TPM4-212ENST00000590180 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 A0A087WWC5 75 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 XKRY2A2RUG3 117 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 C19orf71A6NCJ1 209 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 PSCAO43653 123 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 LINC00694P0DN24 101 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 RAB4BP61018 213 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 Q9HAA7 133 aa8.15□□□□□ -1.1
TPM4-212ENST00000590180 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 IBA57-AS1B1ANH7 110 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 NUDT10Q8NFP7 164 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 OCC1Q8TAD7 63 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 NUDT11Q96G61 164 aa8.14□□□□□ -1.11
TPM4-212ENST00000590180 PKHD1P08F94 4074 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 TRBV7-3A0A075B6L6 115 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 A0A087WTM6 91 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 CEBPGP53567 150 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 CACNG7P62955 275 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 PGPEP1Q9NXJ5 209 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 URGCP-MRPS24S4R325 110 aa8.13□□□□□ -1.11
TPM4-212ENST00000590180 F2Z2F3 143 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 MGPP08493 103 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 IGLC6P0CF74 106 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 FUSP35637 526 aaKnown RBP eCLIP8.12□□□□□ -1.11
TPM4-212ENST00000590180 UBE2D3P61077 147 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 UBE2D2P62837 147 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 Q8N3U1 123 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.12□□□□□ -1.11
TPM4-212ENST00000590180 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
TPM4-212ENST00000590180 EIF5A2Q9GZV4 153 aaKnown RBP8.12□□□□□ -1.11
TPM4-212ENST00000590180 KIAA1109Q2LD37 5005 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 TMEM262E9PQX1 116 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 TOR2AQ5JU69 321 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 KCNIP4Q6PIL6 250 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
TPM4-212ENST00000590180 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 OR10G8Q8NGN5 311 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 LYPD6BQ8NI32 183 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
TPM4-212ENST00000590180 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
TPM4-212ENST00000590180 KIF25-AS1Q9Y6Z4 181 aa8.11□□□□□ -1.11
TPM4-212ENST00000590180 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
TPM4-212ENST00000590180 A0A087WX48 190 aa8.1□□□□□ -1.11
TPM4-212ENST00000590180 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
TPM4-212ENST00000590180 NIT1Q86X76 327 aa8.1□□□□□ -1.11
TPM4-212ENST00000590180 TM2D2Q9BX73 214 aa8.1□□□□□ -1.11
TPM4-212ENST00000590180 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
TPM4-212ENST00000590180 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms