RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
H3F3B-208ENST00000589599 WFDC10BQ8IUB3 73 aa11.54□□□□□ -0.56
H3F3B-208ENST00000589599 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
H3F3B-208ENST00000589599 SSBP4Q9BWG4 385 aaPredicted RBP11.54□□□□□ -0.56
H3F3B-208ENST00000589599 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
H3F3B-208ENST00000589599 XKRY2A2RUG3 117 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 SNAI2O43623 268 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 P01737 135 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 CRYGDP07320 174 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 TNP2Q05952 138 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 GAGE1Q13065 139 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 GAGE4Q13068 117 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 GAGE5Q13069 117 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 OR10AG1Q8NH19 301 aa11.53□□□□□ -0.56
H3F3B-208ENST00000589599 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.57
H3F3B-208ENST00000589599 LINC00315P59091 139 aa11.52□□□□□ -0.57
H3F3B-208ENST00000589599 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.57
H3F3B-208ENST00000589599 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
H3F3B-208ENST00000589599 LYPD6BQ8NI32 183 aa11.52□□□□□ -0.57
H3F3B-208ENST00000589599 PKD1P98161 4303 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 TRBV20OR9-2A0A075B6H5 130 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 LELP1Q5T871 98 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 NFE4Q86UQ8 179 aa11.51□□□□□ -0.57
H3F3B-208ENST00000589599 IGHV3-38A0A0C4DH36 116 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 MUC21A0A0G2JKD1 596 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 MUC21A0A140T8X8 626 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 SSTP61278 116 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
H3F3B-208ENST00000589599 EIF5A2Q9GZV4 153 aaKnown RBP11.5□□□□□ -0.57
H3F3B-208ENST00000589599 A0A087WWC5 75 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 TRBV10-1A0A0K0K1A3 114 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 GZMBP10144 247 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 RAB4BP61018 213 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 MSRB1Q9NZV6 116 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 PKHD1P08F94 4074 aa11.49□□□□□ -0.57
H3F3B-208ENST00000589599 F2Z2F3 143 aa11.48□□□□□ -0.57
H3F3B-208ENST00000589599 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
H3F3B-208ENST00000589599 CACNG7P62955 275 aa11.48□□□□□ -0.57
H3F3B-208ENST00000589599 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
H3F3B-208ENST00000589599 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
H3F3B-208ENST00000589599 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
H3F3B-208ENST00000589599 Q9UF83 564 aa11.48□□□□□ -0.57
H3F3B-208ENST00000589599 F5H697 171 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 IGLC6P0CF74 106 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 CEBPGP53567 150 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 ZNF56Q15929 161 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 LINC01556Q5JQF7 62 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 TOR2AQ5JU69 321 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 AP1S3Q96PC3 154 aa11.47□□□□□ -0.57
H3F3B-208ENST00000589599 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
H3F3B-208ENST00000589599 TRBV7-3A0A075B6L6 115 aa11.45□□□□□ -0.58
H3F3B-208ENST00000589599 NDUFS6O75380 124 aaKnown RBP11.45□□□□□ -0.58
H3F3B-208ENST00000589599 FAM210AQ96ND0 272 aa11.45□□□□□ -0.58
H3F3B-208ENST00000589599 RPP21Q9H633 154 aaKnown RBP11.45□□□□□ -0.58
H3F3B-208ENST00000589599 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
H3F3B-208ENST00000589599 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
H3F3B-208ENST00000589599 K7EN84 100 aa11.44□□□□□ -0.58
H3F3B-208ENST00000589599 EREGO14944 169 aa11.44□□□□□ -0.58
H3F3B-208ENST00000589599 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
H3F3B-208ENST00000589599 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
H3F3B-208ENST00000589599 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
H3F3B-208ENST00000589599 IGHV3-30P01768 117 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 IGHV3-33P01772 117 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 IGHV3-30-3P0DP02 117 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 IGHV3-30-5P0DP03 117 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 WDR73Q6P4I2 378 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 OR10G8Q8NGN5 311 aa11.43□□□□□ -0.58
H3F3B-208ENST00000589599 C16orf90A8MZG2 172 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 IBA57-AS1B1ANH7 110 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 ERVFC1-1P60608 527 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 UBE2D3P61077 147 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 UBE2D2P62837 147 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 SMIM7Q9BQ49 75 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 KIF25-AS1Q9Y6Z4 181 aa11.42□□□□□ -0.58
H3F3B-208ENST00000589599 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
H3F3B-208ENST00000589599 MGPP08493 103 aa11.41□□□□□ -0.58
H3F3B-208ENST00000589599 SPATA12Q7Z6I5 190 aa11.41□□□□□ -0.58
H3F3B-208ENST00000589599 URGCP-MRPS24S4R325 110 aa11.41□□□□□ -0.58
H3F3B-208ENST00000589599 ZNF727A8MUV8 499 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 H7C1H1 209 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 SRP19P09132 144 aaKnown RBP11.4□□□□□ -0.58
H3F3B-208ENST00000589599 NTF3P20783 257 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 CTRLP40313 264 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 FAM231DQ6ZW35 169 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
H3F3B-208ENST00000589599 A8MWL6 223 aa11.39□□□□□ -0.59
H3F3B-208ENST00000589599 PSCAO43653 123 aa11.39□□□□□ -0.59
H3F3B-208ENST00000589599 TWIST1Q15672 202 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms