RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 FXYD5Q96DB9 178 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 C2orf16Q68DN1 1984 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 UBE2L6O14933 153 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3-9P01782 118 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 MYO7AQ13402 2215 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 UNC80Q8N2C7 3258 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV2-18A0A075B6J9 118 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3OR16-10A0A075B7F0 116 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV3-32A0A0A0MS00 114 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3-20A0A0C4DH32 117 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 TRBV10-3A0A0K0K1G6 114 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 STATHP02808 62 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 SPTSSAQ969W0 71 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 VCANP13611 3396 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 TNRC18O15417 2968 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 SPTBN5Q9NRC6 3674 aaKnown RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 H7C2G1 150 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 UBE2BP63146 152 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 ESRGQ1W209 222 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 NRACQ8N912 160 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 LINC00588Q9Y4M8 146 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 EML6Q6ZMW3 1958 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 A0A0J9YX75 114 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 E7EUB6 86 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 FAM53AQ6NSI3 398 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 ZNF826PQ6ZT77 177 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 GGNQ86UU5 652 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 MPLKIPQ8TAP9 179 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV4OR15-8A0A075B7B6 117 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 TRAV8-3A0A0A6YYJ7 113 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 ZNF73O43830 326 aaPredicted RBP4.11□□□□□ -1.75
LINC01538-201ENST00000588074 Q1T7F1 81 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 CLLU1OSQ5K130 101 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 C10orf113Q5VZT2 155 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 LYZL1Q6UWQ5 148 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 PHF5AQ7RTV0 110 aaKnown RBP4.11□□□□□ -1.75
LINC01538-201ENST00000588074 VN1R4Q7Z5H5 301 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 VMO1Q7Z5L0 202 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 F8WEM9 126 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 DNAL4O96015 105 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 Q8IYB0 196 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 RNF185Q96GF1 192 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 CEP290O15078 2479 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 A0A087WVE0 104 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 IGKV3D-7A0A0C4DH55 119 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 LY6G6EA0A0G2JKS1 128 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TMEM256-PLSCR3K7ERE1 68 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 BLCAPP62952 87 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TOMM6Q96B49 74 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 PRUNE2Q8WUY3 3088 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CHD7Q9P2D1 2997 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 GON4LQ3T8J9 2241 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV1OR21-1A0A087WYE8 117 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DEFB134Q4QY38 66 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 LINC00242Q5T6M2 205 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 MORN5Q5VZ52 161 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 KLHL30-AS1Q8NEE0 82 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DYNLRB2Q8TF09 96 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CLEC2BQ92478 149 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 AMELXQ99217 191 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CNFNQ9BYD5 112 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 SPRR3Q9UBC9 169 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DOCK7Q96N67 2140 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 E7EQL1 145 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 J3QT63 122 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 M0R3E3 92 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 FSTL3O95633 263 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 COL4A6Q14031 1691 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 I3L3M4 83 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 ZNF876PQ49A33 203 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 Q6ZRP5 223 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 LCA10Q71F78 164 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 IMMP1LQ96LU5 166 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 CTSZQ9UBR2 303 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 COX7A2LO14548 114 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 PROP1O75360 226 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 IGLV3-21P80748 117 aaPredicted RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 C2orf83Q53S99 150 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 C14orf178Q8N769 122 aaPredicted RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 BPESC1Q9GZL8 116 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 COL6A3P12111 3177 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 TNRC6BQ9UPQ9 1833 aaKnown RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 IGKV1OR2-108A0A075B7D4 117 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 EPOPA6NHQ4 379 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms