RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TEX261Q6UWH6 196 aa6.94□□□□□ -1.3
TPM4-207ENST00000588032 OR2D3Q8NGH3 330 aa6.94□□□□□ -1.3
TPM4-207ENST00000588032 FAM210AQ96ND0 272 aa6.94□□□□□ -1.3
TPM4-207ENST00000588032 EIF5A2Q9GZV4 153 aaKnown RBP6.94□□□□□ -1.3
TPM4-207ENST00000588032 LOC100131303A0A0U1RQF7 123 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 PRSS29PA6NIE9 313 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 F2Z2F3 143 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 RTL8CO15255 209 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 CRYGDP07320 174 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 C6orf223Q8N319 242 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 ATP6V0E2Q8NHE4 81 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 JPT2Q9H910 190 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
TPM4-207ENST00000588032 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 RAB4BP61018 213 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 CACNG7P62955 275 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 FAM74A4Q5TZK3 123 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 Q6ZSN1 163 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 OR10AG1Q8NH19 301 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 OCC1Q8TAD7 63 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
TPM4-207ENST00000588032 A0A087WWL8 130 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 TRBV10-1A0A0K0K1A3 114 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 IGLC6P0CF74 106 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 EVI2AP22794 236 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 WDR73Q6P4I2 378 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
TPM4-207ENST00000588032 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 A0A087WWC5 75 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 A6NJY4 79 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 DNAH10OSP0CZ25 163 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 LINC00694P0DN24 101 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 GAGE1Q13065 139 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 GAGE4Q13068 117 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 GAGE5Q13069 117 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 LELP1Q5T871 98 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 FAM231DQ6ZW35 169 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 C14orf178Q8N769 122 aaPredicted RBP6.9□□□□□ -1.3
TPM4-207ENST00000588032 AP1S3Q96PC3 154 aa6.9□□□□□ -1.3
TPM4-207ENST00000588032 RPP21Q9H633 154 aaKnown RBP6.9□□□□□ -1.3
TPM4-207ENST00000588032 IGHV3-38A0A0C4DH36 116 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 ZNF727A8MUV8 499 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
TPM4-207ENST00000588032 K7EN84 100 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 SRP19P09132 144 aaKnown RBP6.89□□□□□ -1.31
TPM4-207ENST00000588032 GZMBP10144 247 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 CEBPGP53567 150 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
TPM4-207ENST00000588032 PEA15Q15121 130 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 FAM74A3Q4VXF1 159 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 NFE4Q86UQ8 179 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
TPM4-207ENST00000588032 SMIM7Q9BQ49 75 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
TPM4-207ENST00000588032 KMT2AQ03164 3969 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 TRBV7-3A0A075B6L6 115 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 MUC21A0A0G2JKD1 596 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 MUC21A0A140T8X8 626 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 A8MWL6 223 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 F5H697 171 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 TRGC1P0CF51 173 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 SSTP61278 116 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 ZNF56Q15929 161 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 LYZL1Q6UWQ5 148 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.88□□□□□ -1.31
TPM4-207ENST00000588032 OR10G8Q8NGN5 311 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 RNASE7Q9H1E1 156 aaKnown RBP6.88□□□□□ -1.31
TPM4-207ENST00000588032 KIF25-AS1Q9Y6Z4 181 aa6.88□□□□□ -1.31
TPM4-207ENST00000588032 H7C1H1 209 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 GATCO43716 136 aaKnown RBP6.87□□□□□ -1.31
TPM4-207ENST00000588032 NTF3P20783 257 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 CTRLP40313 264 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 TMEM241Q24JQ0 296 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 CT83Q5H943 113 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 LINC01551Q86U37 167 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 Q9UF83 564 aa6.87□□□□□ -1.31
TPM4-207ENST00000588032 FOXA3P55318 350 aaPredicted RBP6.86□□□□□ -1.31
TPM4-207ENST00000588032 LINC00315P59091 139 aa6.86□□□□□ -1.31
TPM4-207ENST00000588032 UBE2D3P61077 147 aa6.86□□□□□ -1.31
TPM4-207ENST00000588032 UBE2D2P62837 147 aa6.86□□□□□ -1.31
TPM4-207ENST00000588032 TNP2Q05952 138 aa6.86□□□□□ -1.31
TPM4-207ENST00000588032 OSTCQ9NRP0 149 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms