RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 HSD17B11Q8NBQ5 300 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 OR8A1Q8NGG7 326 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 C7orf33Q8WU49 177 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 RPUSD4Q96CM3 377 aaKnown RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 LINC00052Q96N35 136 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 MRPL32Q9BYC8 188 aaKnown RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 ACTR3CQ9C0K3 210 aaPredicted RBP2.6□□□□□ -1.99
VMP1-205ENST00000587470 KCNIP2Q9NS61 270 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 XCL2Q9UBD3 114 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 FUT9Q9Y231 359 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 DNAH7Q8WXX0 4024 aa2.6□□□□□ -1.99
VMP1-205ENST00000587470 STARD9Q9P2P6 4700 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 BORCS7-ASMTA0A0B4J1R7 106 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 HMGB3O15347 200 aaKnown RBP2.59□□□□□ -1.99
VMP1-205ENST00000587470 OR10J4P0C629 311 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 SEC11BP0C7V7 166 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 STAG3L2P0CL84 134 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 RHOBP62745 196 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 PSG9Q00887 426 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 DEFB135Q30KP9 77 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 MORN3Q6PF18 240 aaPredicted RBP2.59□□□□□ -1.99
VMP1-205ENST00000587470 ZNF705AQ6ZN79 300 aaPredicted RBP2.59□□□□□ -1.99
VMP1-205ENST00000587470 C1orf158Q8N1D5 194 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 LYPD1Q8N2G4 141 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 EXOC3-AS1Q8N2X6 119 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 C9orf62Q8N4C0 152 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 Q8NAQ8 132 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 ZNF738Q8NE65 137 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 OR10G4Q8NGN3 311 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 OR10G9Q8NGN4 311 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 GNPNAT1Q96EK6 184 aaPredicted RBP2.59□□□□□ -1.99
VMP1-205ENST00000587470 FAM19A4Q96LR4 140 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 SLC50A1Q9BRV3 221 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 AGPAT4-IT1Q9H0P7 198 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 SLC35B3Q9H1N7 401 aa2.59□□□□□ -1.99
VMP1-205ENST00000587470 IGKV2-40A0A087WW87 121 aaPredicted RBP2.58□□□□□ -2
VMP1-205ENST00000587470 KRTAP4-16G5E9R7 235 aaPredicted RBP2.58□□□□□ -2
VMP1-205ENST00000587470 M0R2Z0 102 aa2.58□□□□□ -2
VMP1-205ENST00000587470 OR7C2O60412 319 aa2.58□□□□□ -2
VMP1-205ENST00000587470 IGKV2D-40P01614 121 aaPredicted RBP2.58□□□□□ -2
VMP1-205ENST00000587470 MBP02144 154 aa2.58□□□□□ -2
VMP1-205ENST00000587470 PRM2P04554 102 aa2.58□□□□□ -2
VMP1-205ENST00000587470 ARL14EPLP0DKL9 152 aa2.58□□□□□ -2
VMP1-205ENST00000587470 GCHFRP30047 84 aa2.58□□□□□ -2
VMP1-205ENST00000587470 CDC34P49427 236 aaPredicted RBP2.58□□□□□ -2
VMP1-205ENST00000587470 FXYD7P58549 80 aa2.58□□□□□ -2
VMP1-205ENST00000587470 TAS2R45P59539 299 aa2.58□□□□□ -2
VMP1-205ENST00000587470 RANP62826 216 aaKnown RBP2.58□□□□□ -2
VMP1-205ENST00000587470 ERCC8Q13216 396 aa2.58□□□□□ -2
VMP1-205ENST00000587470 SPINK13Q1W4C9 94 aa2.58□□□□□ -2
VMP1-205ENST00000587470 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
VMP1-205ENST00000587470 AKAP14Q86UN6 197 aa2.58□□□□□ -2
VMP1-205ENST00000587470 BAP18Q8IXM2 172 aa2.58□□□□□ -2
VMP1-205ENST00000587470 ZFAND2AQ8N6M9 145 aa2.58□□□□□ -2
VMP1-205ENST00000587470 OR4B1Q8NGF8 309 aa2.58□□□□□ -2
VMP1-205ENST00000587470 OR11H2Q8NH07 326 aa2.58□□□□□ -2
VMP1-205ENST00000587470 STOML3Q8TAV4 291 aa2.58□□□□□ -2
VMP1-205ENST00000587470 BLNKQ8WV28 456 aa2.58□□□□□ -2
VMP1-205ENST00000587470 MBD3L1Q8WWY6 194 aa2.58□□□□□ -2
VMP1-205ENST00000587470 TVP23CQ96ET8 276 aa2.58□□□□□ -2
VMP1-205ENST00000587470 HYLS1Q96M11 299 aa2.58□□□□□ -2
VMP1-205ENST00000587470 IGF2BP2-AS1Q96M15 143 aa2.58□□□□□ -2
VMP1-205ENST00000587470 LINC00477Q96M19 166 aa2.58□□□□□ -2
VMP1-205ENST00000587470 ODF3Q96PU9 254 aa2.58□□□□□ -2
VMP1-205ENST00000587470 ZNF471Q9BX82 626 aaPredicted RBP2.58□□□□□ -2
VMP1-205ENST00000587470 PRELID1Q9Y255 219 aa2.58□□□□□ -2
VMP1-205ENST00000587470 GOLT1BQ9Y3E0 138 aa2.58□□□□□ -2
VMP1-205ENST00000587470 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
VMP1-205ENST00000587470 HECTD4Q9Y4D8 3996 aa2.58□□□□□ -2
VMP1-205ENST00000587470 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
VMP1-205ENST00000587470 TRAV1-1A0A0B4J248 108 aa2.57□□□□□ -2
VMP1-205ENST00000587470 CTXND1A0A1B0GTU2 59 aa2.57□□□□□ -2
VMP1-205ENST00000587470 PLAC8L1A1L4L8 177 aa2.57□□□□□ -2
VMP1-205ENST00000587470 PGPA6NDG6 321 aa2.57□□□□□ -2
VMP1-205ENST00000587470 GGTLC3B5MD39 225 aa2.57□□□□□ -2
VMP1-205ENST00000587470 UMAD1C9J7I0 102 aa2.57□□□□□ -2
VMP1-205ENST00000587470 SIVA1O15304 175 aa2.57□□□□□ -2
VMP1-205ENST00000587470 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
VMP1-205ENST00000587470 NMBP08949 121 aa2.57□□□□□ -2
VMP1-205ENST00000587470 CRISP2P16562 243 aa2.57□□□□□ -2
VMP1-205ENST00000587470 SULT1A2P50226 295 aa2.57□□□□□ -2
VMP1-205ENST00000587470 NKX2-5P52952 324 aaPredicted RBP2.57□□□□□ -2
VMP1-205ENST00000587470 NUTF2P61970 127 aaKnown RBP2.57□□□□□ -2
VMP1-205ENST00000587470 UBE2L3P68036 154 aaKnown RBP2.57□□□□□ -2
VMP1-205ENST00000587470 CCL20P78556 96 aa2.57□□□□□ -2
VMP1-205ENST00000587470 HIST1H1AQ02539 215 aaPredicted RBP2.57□□□□□ -2
VMP1-205ENST00000587470 KHDC3LQ587J8 217 aa2.57□□□□□ -2
VMP1-205ENST00000587470 Q6ZQT7 251 aa2.57□□□□□ -2
VMP1-205ENST00000587470 SLC51BQ86UW2 128 aa2.57□□□□□ -2
VMP1-205ENST00000587470 LRRC20Q8TCA0 184 aa2.57□□□□□ -2
VMP1-205ENST00000587470 OTORQ9NRC9 128 aa2.57□□□□□ -2
VMP1-205ENST00000587470 ZNF492Q9P255 531 aa2.57□□□□□ -2
VMP1-205ENST00000587470 YTHDF2Q9Y5A9 579 aaKnown RBP2.57□□□□□ -2
VMP1-205ENST00000587470 TRAV8-1A0A0A6YYK1 113 aa2.56□□□□□ -2
VMP1-205ENST00000587470 KANTRA0A1W2PQU2 76 aa2.56□□□□□ -2
VMP1-205ENST00000587470 A0A1W2PRE2 83 aa2.56□□□□□ -2
VMP1-205ENST00000587470 RBAKDNA6NC62 111 aa2.56□□□□□ -2
VMP1-205ENST00000587470 SMIM9A6NGZ8 99 aa2.56□□□□□ -2
VMP1-205ENST00000587470 LYRM9A8MSI8 78 aa2.56□□□□□ -2
VMP1-205ENST00000587470 ZNF705GA8MUZ8 300 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms