RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 AZU1P20160 251 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 RAB4AP20338 218 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 EVI2AP22794 236 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 MRPL51Q4U2R6 128 aaKnown RBP4.52□□□□□ -1.69
LIG3-206ENST00000586058 PDZD11Q5EBL8 140 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 Q6ZQT7 251 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 C14orf178Q8N769 122 aaPredicted RBP4.52□□□□□ -1.69
LIG3-206ENST00000586058 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 CHCHD1Q96BP2 118 aaKnown RBP4.52□□□□□ -1.69
LIG3-206ENST00000586058 ALKBH7Q9BT30 221 aaPredicted RBP4.52□□□□□ -1.69
LIG3-206ENST00000586058 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
LIG3-206ENST00000586058 SCRT2Q9NQ03 307 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 GSN-AS1Q9NRJ2 163 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 AP5S1Q9NUS5 200 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 C19orf73Q9NVV2 129 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 MDFICQ9P1T7 246 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 NACAE9PAV3 2078 aa4.52□□□□□ -1.69
LIG3-206ENST00000586058 TRGV2A0A075B6R0 118 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 TCAPO15273 167 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 SERF1AO75920 110 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 NCR2O95944 276 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
LIG3-206ENST00000586058 RBMY1CP0DJD4 496 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 IGHV4-30-4P0DP06 118 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 FABP4P15090 132 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 G0S2P27469 103 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 AMTP48728 403 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 EGFEM1PQ0D2K5 195 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
LIG3-206ENST00000586058 DEFB135Q30KP9 77 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 LGALS9BQ3B8N2 356 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
LIG3-206ENST00000586058 C1orf158Q8N1D5 194 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 RNASE8Q8TDE3 154 aaKnown RBP4.51□□□□□ -1.69
LIG3-206ENST00000586058 PTH2Q96A98 100 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 MRPL16Q9NX20 251 aaKnown RBP4.51□□□□□ -1.69
LIG3-206ENST00000586058 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
LIG3-206ENST00000586058 FLNBO75369 2602 aaKnown RBP4.5□□□□□ -1.69
LIG3-206ENST00000586058 ANK3Q12955 4377 aaKnown RBP4.5□□□□□ -1.69
LIG3-206ENST00000586058 A0A087WWL8 130 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 LINC01549A6NIU2 74 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 K7EMI3 77 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 GHRHP01286 108 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 LINC00614P0C842 121 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 MIFP14174 115 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 HOXA5P20719 270 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 IQCJQ1A5X6 159 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 ZNF705AQ6ZN79 300 aaPredicted RBP4.5□□□□□ -1.69
LIG3-206ENST00000586058 Q6ZWC4 215 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 HIST3H2BBQ8N257 126 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 OR4C5Q8NGB2 326 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 PACRGQ96M98 296 aaPredicted RBP4.5□□□□□ -1.69
LIG3-206ENST00000586058 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 C20orf78Q9BR46 151 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 ST20Q9HBF5 79 aa4.5□□□□□ -1.69
LIG3-206ENST00000586058 TEP1Q99973 2627 aaKnown RBP4.5□□□□□ -1.69
LIG3-206ENST00000586058 TRAV4A0A0B4J268 109 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 C20orf202A1L168 122 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 NPYP01303 97 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 ESDP10768 282 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 FCER1GP30273 86 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 EMP1P54849 157 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
LIG3-206ENST00000586058 DAZ2Q13117 558 aaKnown RBP4.49□□□□□ -1.69
LIG3-206ENST00000586058 ORMDL2Q53FV1 153 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 ZFP2Q6ZN57 461 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 C11orf72Q8NBR9 251 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 SPATA3Q8NHX4 192 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 SMIM2Q9BVW6 85 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 NOP10Q9NPE3 64 aaKnown RBP4.49□□□□□ -1.69
LIG3-206ENST00000586058 HSPB8Q9UJY1 196 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 TNFRSF18Q9Y5U5 241 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 U3KQK5 164 aa4.49□□□□□ -1.69
LIG3-206ENST00000586058 NF1P21359 2839 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 TRAV26-2A0A0B4J265 109 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 TRGV4A0A0C4DH28 118 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 LOC105371267A0A1B0GV96 52 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 A8MZ25 164 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 G3V4G9 280 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 PAX4O43316 350 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 SPRY2O43597 315 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 HBDP02042 147 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 SMIM6P0DI80 62 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 NIT1Q86X76 327 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 Q8N8P6 123 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 CSNK1G2-AS1Q8NCQ2 148 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 OR11H2Q8NH07 326 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 RASL10AQ92737 203 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 RNF185Q96GF1 192 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 DNAJC30Q96LL9 226 aa4.48□□□□□ -1.69
LIG3-206ENST00000586058 NIT2Q9NQR4 276 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms