RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 INAFM1C9JVW0 142 aa11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 SNRPD3P62318 126 aaKnown RBP11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 SPCS1Q9Y6A9 102 aa11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 CSN3P07498 182 aa11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 RNASEKQ6P5S7 137 aaKnown RBP11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 GATD1Q8NB37 220 aa11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
LDLRAD4-205ENST00000585931 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 FHL3Q13643 280 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 SPATA12Q7Z6I5 190 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
LDLRAD4-205ENST00000585931 H3BUT2 72 aa11.28□□□□□ -0.6
LDLRAD4-205ENST00000585931 TWIST1Q15672 202 aa11.28□□□□□ -0.6
LDLRAD4-205ENST00000585931 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
LDLRAD4-205ENST00000585931 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
LDLRAD4-205ENST00000585931 A0A0J9YX75 114 aa11.27□□□□□ -0.6
LDLRAD4-205ENST00000585931 CCL24O00175 119 aa11.27□□□□□ -0.6
LDLRAD4-205ENST00000585931 CNFNQ9BYD5 112 aa11.27□□□□□ -0.6
LDLRAD4-205ENST00000585931 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.6
LDLRAD4-205ENST00000585931 C2CD3Q4AC94 2353 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 B5MCH6 92 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 F8W1H4 67 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 TMEM61Q8N0U2 210 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 ANAPC13Q9BS18 74 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 SIGLEC8Q9NYZ4 499 aa11.27□□□□□ -0.61
LDLRAD4-205ENST00000585931 NDUFA7O95182 113 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 FABP2P12104 132 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 KLLNB2CW77 178 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 SNAI2O43623 268 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 PROK1P58294 105 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 DEFB114Q30KQ6 69 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 PTH2Q96A98 100 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
LDLRAD4-205ENST00000585931 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
LDLRAD4-205ENST00000585931 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
LDLRAD4-205ENST00000585931 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 SPINK8P0C7L1 97 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 FAM104BQ5XKR9 115 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 OR5AL1P0C617 328 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 SPAG8Q99932 426 aaPredicted RBP11.24□□□□□ -0.61
LDLRAD4-205ENST00000585931 IGHV1-24A0A0C4DH33 117 aa11.23□□□□□ -0.61
LDLRAD4-205ENST00000585931 TMEM191AQ9H0A3 160 aa11.23□□□□□ -0.61
LDLRAD4-205ENST00000585931 TRAV12-2A0A075B6T6 113 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 A0A087WX48 190 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 H3BVH4 76 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 GNRH2O43555 120 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 DEFB131AP59861 70 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
LDLRAD4-205ENST00000585931 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 D6R8Y8 96 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 SYS1-DBNDD2H3BUS1 97 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 M0QXV9 152 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 SPRY2O43597 315 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 KRTAP10-3P60369 221 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 ODF3Q96PU9 254 aa11.21□□□□□ -0.61
LDLRAD4-205ENST00000585931 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 KNCNA6PVL3 124 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 LEPROTL1O95214 131 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 COX8AP10176 69 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 C2orf91Q6ZV80 131 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 RNF185Q96GF1 192 aa11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 TIMM8BQ9Y5J9 83 aaPredicted RBP11.21□□□□□ -0.62
LDLRAD4-205ENST00000585931 LEPP41159 167 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 SPINK13Q1W4C9 94 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 AMTNQ6UX39 209 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 U3KQK5 164 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 F8P00451 2351 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 DUSP14O95147 198 aaKnown RBP11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 EVI2AP22794 236 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 TENM1Q9UKZ4 2725 aa11.2□□□□□ -0.62
LDLRAD4-205ENST00000585931 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
LDLRAD4-205ENST00000585931 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
LDLRAD4-205ENST00000585931 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
LDLRAD4-205ENST00000585931 SPANXN1Q5VSR9 72 aa11.19□□□□□ -0.62
LDLRAD4-205ENST00000585931 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE7O76087 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE12FP0CL80 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE12GP0CL81 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE12IP0CL82 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 RNASE3P12724 160 aaKnown RBP11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 ASIPP42127 132 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 GAGE4Q13068 117 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 ORMDL3Q8N138 153 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 MAP6D1Q9H9H5 199 aa11.18□□□□□ -0.62
LDLRAD4-205ENST00000585931 MUC4Q99102 2169 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms