RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 IGLV2-8P01709 118 aa18.53■□□□□ 0.56
SMARCD2-210ENST00000584400 TNP2Q05952 138 aa18.53■□□□□ 0.56
SMARCD2-210ENST00000584400 SPANXN1Q5VSR9 72 aa18.53■□□□□ 0.56
SMARCD2-210ENST00000584400 Q6ZSN1 163 aa18.53■□□□□ 0.56
SMARCD2-210ENST00000584400 A0A087WWL8 130 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 LINC00315P59091 139 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 OR10J3Q5JRS4 329 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 NFE4Q86UQ8 179 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 C10orf126Q8N4M7 172 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 LYPD6BQ8NI32 183 aa18.52■□□□□ 0.56
SMARCD2-210ENST00000584400 IGHV3-38A0A0C4DH36 116 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 GAGE12JA6NER3 117 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 RBFOX3A6NFN3 312 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 CRYGDP07320 174 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 GAGE1Q13065 139 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 GAGE4Q13068 117 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 GAGE5Q13069 117 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 GAGE13Q4V321 117 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 LELP1Q5T871 98 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 OR2D3Q8NGH3 330 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 OR10AG1Q8NH19 301 aa18.51■□□□□ 0.55
SMARCD2-210ENST00000584400 P01737 135 aa18.5■□□□□ 0.55
SMARCD2-210ENST00000584400 C19orf71A6NCJ1 209 aa18.49■□□□□ 0.55
SMARCD2-210ENST00000584400 TMEM250H0YL14 139 aa18.49■□□□□ 0.55
SMARCD2-210ENST00000584400 C14orf178Q8N769 122 aaPredicted RBP18.49■□□□□ 0.55
SMARCD2-210ENST00000584400 TRBV20OR9-2A0A075B6H5 130 aa18.48■□□□□ 0.55
SMARCD2-210ENST00000584400 TRBV10-1A0A0K0K1A3 114 aa18.48■□□□□ 0.55
SMARCD2-210ENST00000584400 A0A087WWC5 75 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 SMIM17P0DL12 118 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 LINC00694P0DN24 101 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 RAB4BP61018 213 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 LINC01556Q5JQF7 62 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 FER1L6-AS1Q8NA97 138 aa18.46■□□□□ 0.55
SMARCD2-210ENST00000584400 FAT2Q9NYQ8 4349 aa18.45■□□□□ 0.54
SMARCD2-210ENST00000584400 RPL36AP83881 106 aaKnown RBP18.45■□□□□ 0.54
SMARCD2-210ENST00000584400 RPL36ALQ969Q0 106 aaKnown RBP18.45■□□□□ 0.54
SMARCD2-210ENST00000584400 TPPP3Q9BW30 176 aa18.45■□□□□ 0.54
SMARCD2-210ENST00000584400 MSRB1Q9NZV6 116 aa18.45■□□□□ 0.54
SMARCD2-210ENST00000584400 F2Z2F3 143 aa18.44■□□□□ 0.54
SMARCD2-210ENST00000584400 CACNG7P62955 275 aa18.44■□□□□ 0.54
SMARCD2-210ENST00000584400 ZNF56Q15929 161 aa18.44■□□□□ 0.54
SMARCD2-210ENST00000584400 AP1S3Q96PC3 154 aa18.44■□□□□ 0.54
SMARCD2-210ENST00000584400 EIF5A2Q9GZV4 153 aaKnown RBP18.44■□□□□ 0.54
SMARCD2-210ENST00000584400 NDUFS6O75380 124 aaKnown RBP18.43■□□□□ 0.54
SMARCD2-210ENST00000584400 IGLC6P0CF74 106 aa18.43■□□□□ 0.54
SMARCD2-210ENST00000584400 HECTD4Q9Y4D8 3996 aa18.42■□□□□ 0.54
SMARCD2-210ENST00000584400 MUC21A0A0G2JKD1 596 aa18.42■□□□□ 0.54
SMARCD2-210ENST00000584400 MUC21A0A140T8X8 626 aa18.42■□□□□ 0.54
SMARCD2-210ENST00000584400 SSTP61278 116 aa18.42■□□□□ 0.54
SMARCD2-210ENST00000584400 DNAH17Q9UFH2 4485 aa18.42■□□□□ 0.54
SMARCD2-210ENST00000584400 GZMBP10144 247 aa18.41■□□□□ 0.54
SMARCD2-210ENST00000584400 TOR2AQ5JU69 321 aa18.41■□□□□ 0.54
SMARCD2-210ENST00000584400 NUDT10Q8NFP7 164 aa18.41■□□□□ 0.54
SMARCD2-210ENST00000584400 OCC1Q8TAD7 63 aa18.41■□□□□ 0.54
SMARCD2-210ENST00000584400 NUDT11Q96G61 164 aa18.41■□□□□ 0.54
SMARCD2-210ENST00000584400 TRBV7-3A0A075B6L6 115 aa18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 F5H697 171 aa18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 EREGO14944 169 aa18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 Q6ZRN7 208 aaPredicted RBP18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 Q9UF83 564 aa18.4■□□□□ 0.54
SMARCD2-210ENST00000584400 FAM210AQ96ND0 272 aa18.39■□□□□ 0.53
SMARCD2-210ENST00000584400 CEBPGP53567 150 aa18.38■□□□□ 0.53
SMARCD2-210ENST00000584400 OR10G8Q8NGN5 311 aa18.38■□□□□ 0.53
SMARCD2-210ENST00000584400 RPP21Q9H633 154 aaKnown RBP18.38■□□□□ 0.53
SMARCD2-210ENST00000584400 IBA57-AS1B1ANH7 110 aa18.37■□□□□ 0.53
SMARCD2-210ENST00000584400 ERVFC1-1P60608 527 aa18.37■□□□□ 0.53
SMARCD2-210ENST00000584400 TNFRSF18Q9Y5U5 241 aa18.37■□□□□ 0.53
SMARCD2-210ENST00000584400 IGHV3-30P01768 117 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 IGHV3-33P01772 117 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 TRGC1P0CF51 173 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 IGHV3-30-3P0DP02 117 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 IGHV3-30-5P0DP03 117 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 UBE2D3P61077 147 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 UBE2D2P62837 147 aa18.36■□□□□ 0.53
SMARCD2-210ENST00000584400 C16orf90A8MZG2 172 aa18.35■□□□□ 0.53
SMARCD2-210ENST00000584400 K7EN84 100 aa18.35■□□□□ 0.53
SMARCD2-210ENST00000584400 WDR73Q6P4I2 378 aa18.35■□□□□ 0.53
SMARCD2-210ENST00000584400 LYZL1Q6UWQ5 148 aa18.35■□□□□ 0.53
SMARCD2-210ENST00000584400 RNASE7Q9H1E1 156 aaKnown RBP18.35■□□□□ 0.53
SMARCD2-210ENST00000584400 SPATA12Q7Z6I5 190 aa18.34■□□□□ 0.53
SMARCD2-210ENST00000584400 KIF25-AS1Q9Y6Z4 181 aa18.34■□□□□ 0.53
SMARCD2-210ENST00000584400 URGCP-MRPS24S4R325 110 aa18.34■□□□□ 0.53
SMARCD2-210ENST00000584400 H7C1H1 209 aa18.33■□□□□ 0.52
SMARCD2-210ENST00000584400 LAGE3Q14657 143 aa18.33■□□□□ 0.52
SMARCD2-210ENST00000584400 TEX261Q6UWH6 196 aa18.33■□□□□ 0.52
SMARCD2-210ENST00000584400 NEXN-AS1Q8NBZ9 246 aa18.33■□□□□ 0.52
SMARCD2-210ENST00000584400 SMIM7Q9BQ49 75 aa18.33■□□□□ 0.52
SMARCD2-210ENST00000584400 CTRLP40313 264 aa18.32■□□□□ 0.52
SMARCD2-210ENST00000584400 FAM231DQ6ZW35 169 aa18.32■□□□□ 0.52
SMARCD2-210ENST00000584400 GATCO43716 136 aaKnown RBP18.31■□□□□ 0.52
SMARCD2-210ENST00000584400 MGPP08493 103 aa18.31■□□□□ 0.52
SMARCD2-210ENST00000584400 NTF3P20783 257 aa18.31■□□□□ 0.52
SMARCD2-210ENST00000584400 KCNIP4Q6PIL6 250 aa18.31■□□□□ 0.52
SMARCD2-210ENST00000584400 ZNF727A8MUV8 499 aa18.3■□□□□ 0.52
SMARCD2-210ENST00000584400 PSCAO43653 123 aa18.3■□□□□ 0.52
SMARCD2-210ENST00000584400 TMEM97Q5BJF2 176 aa18.3■□□□□ 0.52
SMARCD2-210ENST00000584400 SRP19P09132 144 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-210ENST00000584400 DAZ4Q86SG3 579 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-210ENST00000584400 CNFNQ9BYD5 112 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms