RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 TMEM241Q24JQ0 296 aa11.32□□□□□ -0.6
RNF43-206ENST00000582293 LYZL1Q6UWQ5 148 aa11.32□□□□□ -0.6
RNF43-206ENST00000582293 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
RNF43-206ENST00000582293 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
RNF43-206ENST00000582293 DNAH10Q8IVF4 4471 aa11.32□□□□□ -0.6
RNF43-206ENST00000582293 GATCO43716 136 aaKnown RBP11.31□□□□□ -0.6
RNF43-206ENST00000582293 CTRLP40313 264 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 LINC00315P59091 139 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 SSTP61278 116 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 C14orf178Q8N769 122 aaPredicted RBP11.31□□□□□ -0.6
RNF43-206ENST00000582293 ZNRF2Q8NHG8 242 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 TPPP3Q9BW30 176 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 NAT8Q9UHE5 227 aa11.31□□□□□ -0.6
RNF43-206ENST00000582293 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
RNF43-206ENST00000582293 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
RNF43-206ENST00000582293 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
RNF43-206ENST00000582293 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
RNF43-206ENST00000582293 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
RNF43-206ENST00000582293 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
RNF43-206ENST00000582293 RHODO00212 210 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 CCL18P55774 89 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 RHOHQ15669 191 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 CT83Q5H943 113 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 LYPD5Q6UWN5 251 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 CNFNQ9BYD5 112 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 V9GYV3 84 aa11.29□□□□□ -0.6
RNF43-206ENST00000582293 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
RNF43-206ENST00000582293 F2Z2F3 143 aa11.28□□□□□ -0.6
RNF43-206ENST00000582293 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
RNF43-206ENST00000582293 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
RNF43-206ENST00000582293 MRPS16Q9Y3D3 137 aaKnown RBP11.28□□□□□ -0.6
RNF43-206ENST00000582293 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 SRIP30626 198 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
RNF43-206ENST00000582293 CACNG7P62955 275 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 ADIRFQ15847 76 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 NEGR1Q7Z3B1 354 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 PRADC1Q9BSG0 188 aa11.27□□□□□ -0.61
RNF43-206ENST00000582293 A8MWL6 223 aa11.26□□□□□ -0.61
RNF43-206ENST00000582293 NTF3P20783 257 aa11.26□□□□□ -0.61
RNF43-206ENST00000582293 WDR73Q6P4I2 378 aa11.26□□□□□ -0.61
RNF43-206ENST00000582293 Q6ZR54 194 aa11.26□□□□□ -0.61
RNF43-206ENST00000582293 TSKUQ8WUA8 353 aa11.25□□□□□ -0.61
RNF43-206ENST00000582293 AP1S3Q96PC3 154 aa11.25□□□□□ -0.61
RNF43-206ENST00000582293 GAGE12JA6NER3 117 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 M0R2N4 97 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 ADCYAP1P18509 176 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 EVI2AP22794 236 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 RAB4BP61018 213 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 GAGE1Q13065 139 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 GAGE4Q13068 117 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 GAGE5Q13069 117 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 GAGE13Q4V321 117 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 PGLYRP4Q96LB8 373 aa11.24□□□□□ -0.61
RNF43-206ENST00000582293 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 ZNF56Q15929 161 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 C15orf54Q8N8G6 183 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 KRTAP1-5Q9BYS1 174 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 GFRA4Q9GZZ7 299 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 Q9H8V8 135 aa11.23□□□□□ -0.61
RNF43-206ENST00000582293 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
RNF43-206ENST00000582293 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
RNF43-206ENST00000582293 TIRAPP58753 221 aa11.22□□□□□ -0.61
RNF43-206ENST00000582293 UQCC3Q6UW78 93 aa11.22□□□□□ -0.61
RNF43-206ENST00000582293 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
RNF43-206ENST00000582293 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
RNF43-206ENST00000582293 FAM231BA6NCW3 169 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 TWIST1Q15672 202 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 COMMD7Q86VX2 200 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 NEXN-AS1Q8NBZ9 246 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 ATP6V0E2Q8NHE4 81 aa11.21□□□□□ -0.61
RNF43-206ENST00000582293 FAT2Q9NYQ8 4349 aa11.21□□□□□ -0.62
RNF43-206ENST00000582293 TRBV10-1A0A0K0K1A3 114 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 NBDYA0A0U1RRE5 68 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 TMEM218A2RU14 115 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 TRGC1P0CF51 173 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 WFDC10BQ8IUB3 73 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 DPH3P1Q9H4G8 78 aa11.2□□□□□ -0.62
RNF43-206ENST00000582293 SMIM27A0A1W2PRY6 76 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 M0QY20 66 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 MGPP08493 103 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 UBE2D3P61077 147 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 UBE2D2P62837 147 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
RNF43-206ENST00000582293 F5H697 171 aa11.18□□□□□ -0.62
RNF43-206ENST00000582293 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
RNF43-206ENST00000582293 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
RNF43-206ENST00000582293 RTL8CO15255 209 aa11.17□□□□□ -0.62
RNF43-206ENST00000582293 SIVA1O15304 175 aa11.17□□□□□ -0.62
RNF43-206ENST00000582293 PNRC1Q12796 327 aaPredicted RBP11.17□□□□□ -0.62
RNF43-206ENST00000582293 RPL36AP83881 106 aaKnown RBP11.16□□□□□ -0.62
RNF43-206ENST00000582293 LELP1Q5T871 98 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms