RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 MED9Q9NWA0 146 aa6.97□□□□□ -1.29
PPP4R1-220ENST00000581835 Q9UF83 564 aa6.97□□□□□ -1.29
PPP4R1-220ENST00000581835 TNFRSF18Q9Y5U5 241 aa6.97□□□□□ -1.29
PPP4R1-220ENST00000581835 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 TRAV9-2A0A087WT02 112 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 A0A087WWL8 130 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 C19orf71A6NCJ1 209 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 K7EP13 123 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 SNAI2O43623 268 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 EVI2AP22794 236 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 TAGLN2P37802 199 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GNG4P50150 75 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 NKX2-5P52952 324 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 BLOC1S1P78537 153 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GAGE1Q13065 139 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GAGE4Q13068 117 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GAGE5Q13069 117 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GAGE13Q4V321 117 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 LELP1Q5T871 98 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 LYPD6BQ8NI32 183 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 SMIM12Q96EX1 92 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 GTSF1LQ9H1H1 148 aa6.96□□□□□ -1.3
PPP4R1-220ENST00000581835 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
PPP4R1-220ENST00000581835 IGHV3-38A0A0C4DH36 116 aa6.95□□□□□ -1.3
PPP4R1-220ENST00000581835 OR5AL1P0C617 328 aa6.95□□□□□ -1.3
PPP4R1-220ENST00000581835 BOLA1Q9Y3E2 137 aa6.95□□□□□ -1.3
PPP4R1-220ENST00000581835 RYR1P21817 5038 aa6.95□□□□□ -1.3
PPP4R1-220ENST00000581835 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 LINC01556Q5JQF7 62 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 OR10J3Q5JRS4 329 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 NFE4Q86UQ8 179 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 C10orf126Q8N4M7 172 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 DAZAP1Q96EP5 407 aaKnown RBP6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 MSRB1Q9NZV6 116 aa6.94□□□□□ -1.3
PPP4R1-220ENST00000581835 RBFOX3A6NFN3 312 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 GZMBP10144 247 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 RPS20P60866 119 aaKnown RBP6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 OR2D3Q8NGH3 330 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
PPP4R1-220ENST00000581835 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 RAB4BP61018 213 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 SSTP61278 116 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 SPATA12Q7Z6I5 190 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 KIF25-AS1Q9Y6Z4 181 aa6.92□□□□□ -1.3
PPP4R1-220ENST00000581835 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 A0A087WWC5 75 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 XKRY2A2RUG3 117 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 K7EN84 100 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 P01737 135 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 IGHV3-30P01768 117 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 IGHV3-30-3P0DP02 117 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 IGHV3-30-5P0DP03 117 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 UBE2D3P61077 147 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 UBE2D2P62837 147 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 ZNF56Q15929 161 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 FER1L6-AS1Q8NA97 138 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 OR10G8Q8NGN5 311 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 OCC1Q8TAD7 63 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 TPPP3Q9BW30 176 aa6.91□□□□□ -1.3
PPP4R1-220ENST00000581835 APOBP04114 4563 aaKnown RBP6.9□□□□□ -1.3
PPP4R1-220ENST00000581835 HSPG2P98160 4391 aa6.9□□□□□ -1.31
PPP4R1-220ENST00000581835 F2Z2F3 143 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 SMIM17P0DL12 118 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 ERVFC1-1P60608 527 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 CACNG7P62955 275 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 TOR2AQ5JU69 321 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 Q8N3U1 123 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 NEXN-AS1Q8NBZ9 246 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 FAM210AQ96ND0 272 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
PPP4R1-220ENST00000581835 A0A087WTM6 91 aa6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 F5H697 171 aa6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 EREGO14944 169 aa6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 NDUFS6O75380 124 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 LAGE3Q14657 143 aa6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 RPP21Q9H633 154 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-220ENST00000581835 NTF3P20783 257 aa6.87□□□□□ -1.31
PPP4R1-220ENST00000581835 CTRLP40313 264 aa6.87□□□□□ -1.31
PPP4R1-220ENST00000581835 CEBPGP53567 150 aa6.87□□□□□ -1.31
PPP4R1-220ENST00000581835 WDR73Q6P4I2 378 aa6.87□□□□□ -1.31
PPP4R1-220ENST00000581835 DAZ4Q86SG3 579 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-220ENST00000581835 NIT1Q86X76 327 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms