RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 NUPR1O60356 82 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 CRYGDP07320 174 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
CTC1-203ENST00000578240 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 PTH2Q96A98 100 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
CTC1-203ENST00000578240 MRPL16Q9NX20 251 aaKnown RBP9.42□□□□□ -0.9
CTC1-203ENST00000578240 A0A087WWL8 130 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 NPYP01303 97 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 PRB2P02812 416 aaPredicted RBP9.41□□□□□ -0.9
CTC1-203ENST00000578240 APOC4P55056 127 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 Q0VG73 95 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 UFSP1Q6NVU6 142 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
CTC1-203ENST00000578240 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
CTC1-203ENST00000578240 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
CTC1-203ENST00000578240 NRACQ8N912 160 aa9.4□□□□□ -0.9
CTC1-203ENST00000578240 SPXQ9BT56 116 aa9.4□□□□□ -0.9
CTC1-203ENST00000578240 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
CTC1-203ENST00000578240 UBE2CO00762 179 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 SERF1AO75920 110 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 Q6ZTI0 123 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 SYT8Q8NBV8 401 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 RASL10AQ92737 203 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 S100A6P06703 90 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 MGPP08493 103 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 HOXA5P20719 270 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 DAZ2Q13117 558 aaKnown RBP9.39□□□□□ -0.91
CTC1-203ENST00000578240 ORMDL3Q8N138 153 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 HIST3H2BBQ8N257 126 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 PRELID3AQ96N28 172 aa9.39□□□□□ -0.91
CTC1-203ENST00000578240 K7EIL1 84 aa9.38□□□□□ -0.91
CTC1-203ENST00000578240 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
CTC1-203ENST00000578240 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
CTC1-203ENST00000578240 RNF183Q96D59 192 aa9.38□□□□□ -0.91
CTC1-203ENST00000578240 NOP10Q9NPE3 64 aaKnown RBP9.38□□□□□ -0.91
CTC1-203ENST00000578240 CKS2P33552 79 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 PDZD11Q5EBL8 140 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 Q6ZWC4 215 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 SMIM15Q7Z3B0 74 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 Q8NAQ8 132 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
CTC1-203ENST00000578240 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 RETNQ9HD89 108 aa9.37□□□□□ -0.91
CTC1-203ENST00000578240 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
CTC1-203ENST00000578240 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 ESDP10768 282 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 MRAP2Q96G30 205 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 RS1O15537 224 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 PPBPP02775 128 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 Q6ZSN1 163 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 OR11H2Q8NH07 326 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 NDUFAF3Q9BU61 184 aa9.36□□□□□ -0.91
CTC1-203ENST00000578240 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
CTC1-203ENST00000578240 SMIM9A6NGZ8 99 aa9.35□□□□□ -0.91
CTC1-203ENST00000578240 A8MWV9 139 aa9.35□□□□□ -0.91
CTC1-203ENST00000578240 BAGE3Q86Y29 109 aa9.35□□□□□ -0.91
CTC1-203ENST00000578240 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
CTC1-203ENST00000578240 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 IGHV3-73A0A0B4J1V6 119 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 ZNF56Q15929 161 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 LAMTOR2Q9Y2Q5 125 aa9.34□□□□□ -0.91
CTC1-203ENST00000578240 M0QY20 66 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 DEFB4AO15263 64 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 EMP1P54849 157 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 HIST1H2BLQ99880 126 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 Q9UF83 564 aa9.33□□□□□ -0.92
CTC1-203ENST00000578240 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 GAGE7O76087 117 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
CTC1-203ENST00000578240 RNASEKQ6P5S7 137 aaKnown RBP9.32□□□□□ -0.92
CTC1-203ENST00000578240 NIT1Q86X76 327 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 A0A096LNJ9 63 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 LOC389332A0A1B0GUA5 103 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 P0DMU3 169 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 FAM231AP0DMU4 169 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 FAM231CP0DMU5 169 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 MIFP14174 115 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
CTC1-203ENST00000578240 LINC01546A6NGU7 62 aa9.31□□□□□ -0.92
CTC1-203ENST00000578240 F5H697 171 aa9.31□□□□□ -0.92
CTC1-203ENST00000578240 RHODO00212 210 aa9.31□□□□□ -0.92
CTC1-203ENST00000578240 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
CTC1-203ENST00000578240 FAM19A2Q8N3H0 131 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms