RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TICRRQ7Z2Z1 1910 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 PRSS33Q8NF86 280 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 RNF223E7ERA6 249 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 IGLC6P0CF74 106 aa8.28□□□□□ -1.08
SEC22B-201ENST00000578049 DKK4Q9UBT3 224 aa8.28□□□□□ -1.08
SEC22B-201ENST00000578049 IGHG2P01859 326 aa8.28□□□□□ -1.08
SEC22B-201ENST00000578049 CFHR3Q02985 330 aa8.28□□□□□ -1.08
SEC22B-201ENST00000578049 NUP210Q8TEM1 1887 aaPredicted RBP8.28□□□□□ -1.08
SEC22B-201ENST00000578049 ODF3Q96PU9 254 aa8.28□□□□□ -1.08
SEC22B-201ENST00000578049 FRMPD3Q5JV73 1810 aa8.27□□□□□ -1.08
SEC22B-201ENST00000578049 PRR30Q53SZ7 412 aaPredicted RBP8.27□□□□□ -1.08
SEC22B-201ENST00000578049 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.08
SEC22B-201ENST00000578049 AJUBAQ96IF1 538 aa8.27□□□□□ -1.08
SEC22B-201ENST00000578049 MDFICQ9P1T7 246 aa8.27□□□□□ -1.08
SEC22B-201ENST00000578049 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 IGKV1D-37A0A075B6S9 117 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 TRAV26-1A0A087WT03 109 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 Q6ZUT4 128 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 SPANXB1Q9NS25 103 aaPredicted RBP8.27□□□□□ -1.09
SEC22B-201ENST00000578049 FSTL3O95633 263 aa8.27□□□□□ -1.09
SEC22B-201ENST00000578049 ATP5EP2Q5VTU8 51 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 COX7A2LO14548 114 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 XCL1P47992 114 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 MP68P56378 58 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 TMEM256-PLSCR3K7ERE1 68 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 FRMD6-AS1P0C7T7 363 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 MIAQ16674 131 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 MRAPQ8TCY5 172 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 ACACBO00763 2458 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 WT1P19544 449 aaPredicted RBP8.26□□□□□ -1.09
SEC22B-201ENST00000578049 C5orf56Q8N8D9 126 aa8.26□□□□□ -1.09
SEC22B-201ENST00000578049 NOP10Q9NPE3 64 aaKnown RBP8.26□□□□□ -1.09
SEC22B-201ENST00000578049 MRPL36Q9P0J6 103 aaKnown RBP8.26□□□□□ -1.09
SEC22B-201ENST00000578049 NCOA6Q14686 2063 aaPredicted RBP8.25□□□□□ -1.09
SEC22B-201ENST00000578049 PRAC2D3DTV9 90 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 ZGRF1Q86YA3 2104 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 UQCRQO14949 82 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 COL4A6Q14031 1691 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 PCNX2A6NKB5 2137 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
SEC22B-201ENST00000578049 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
SEC22B-201ENST00000578049 PLXNB3Q9ULL4 1909 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 NOTCH4Q99466 2003 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 DENND4AQ7Z401 1863 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 SP5Q6BEB4 398 aaPredicted RBP8.24□□□□□ -1.09
SEC22B-201ENST00000578049 KIAA1671Q9BY89 1806 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 NREPQ16612 68 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 FBXL19-AS1Q494R0 122 aa8.24□□□□□ -1.09
SEC22B-201ENST00000578049 PROP1O75360 226 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 EIF4EBP1Q13541 118 aaPredicted RBP8.23□□□□□ -1.09
SEC22B-201ENST00000578049 NDUFV3P56181 108 aaKnown RBP8.23□□□□□ -1.09
SEC22B-201ENST00000578049 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 P0DMU3 169 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 C1orf43Q9BWL3 253 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 ATRXP46100 2492 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 DENND4CQ5VZ89 1909 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 ETDCA0A1B0GVM5 59 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 LECT2O14960 151 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 CRYGBP07316 175 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 PTPRQQ9UMZ3 2332 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 TP73-AS1Q9UF72 201 aa8.23□□□□□ -1.09
SEC22B-201ENST00000578049 TCL1BO95988 128 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 HIST2H2BDQ6DRA6 164 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 RITA1Q96K30 269 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 BRWD1-AS2P59051 145 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 SPRNQ5BIV9 151 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 U3KQK5 164 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 A0A0J9YX75 114 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 RBX1P62877 108 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 NEXN-AS1Q8NBZ9 246 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 SPATA25Q9BR10 227 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 COL4A3Q01955 1670 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 CCL24O00175 119 aa8.22□□□□□ -1.09
SEC22B-201ENST00000578049 IGHV4-59P01825 116 aa8.21□□□□□ -1.09
SEC22B-201ENST00000578049 E7EUB6 86 aa8.21□□□□□ -1.09
SEC22B-201ENST00000578049 CAMK2N2Q96S95 79 aa8.21□□□□□ -1.09
SEC22B-201ENST00000578049 NDUFA1O15239 70 aa8.21□□□□□ -1.1
SEC22B-201ENST00000578049 FAM208BQ5VWN6 2430 aa8.21□□□□□ -1.1
SEC22B-201ENST00000578049 TMEM61Q8N0U2 210 aa8.21□□□□□ -1.1
SEC22B-201ENST00000578049 NDUFB1O75438 58 aa8.21□□□□□ -1.1
SEC22B-201ENST00000578049 CRIP3Q6Q6R5 217 aa8.21□□□□□ -1.1
SEC22B-201ENST00000578049 TP53TG3Q9ULZ0 132 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 WNK1Q9H4A3 2382 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 MYCNOSP40205 109 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 NCKAP5O14513 1909 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 Q8N7P7 452 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
SEC22B-201ENST00000578049 Q6ZPA2 131 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms